研究生: |
張文年 Truong, Van Nam |
---|---|
論文名稱: |
蛇毒 L-氨基酸氧化酶的作用機制及其抗癌雙刃劍效應:泛連接蛋白 1 介導的白細胞介素 6 表達的作用 Action mechanism of snake venom L-amino acid oxidase and its double-edged sword effect on cancer treatment: Role of pannexin 1-mediated interleukin-6 expression |
指導教授: |
吳文桂
Wu, Wen-Guey |
口試委員: |
林立元
Lin, Lih-Yuan 曾晴賢 Tseng, Ching-Hsien 徐子勝 Hsu, Tzu-Sheng 李紹禎 Lee, Shao-Chen |
學位類別: |
博士 Doctor |
系所名稱: |
生命科學暨醫學院 - 生物資訊與結構生物研究所 Institute of Bioinformatics and Structural Biology |
論文出版年: | 2023 |
畢業學年度: | 112 |
語文別: | 英文 |
論文頁數: | 134 |
中文關鍵詞: | 蛇毒 L-氨基酸氧化酶 、白細胞介素 6 、泛連接蛋白 1 |
外文關鍵詞: | Snake venom L-amino acid oxidase, Interleukin 6, Pannexin 1 |
相關次數: | 點閱:2 下載:0 |
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中文摘要
蛇毒中的L-氨基酸氧化酶(svLAAOs)是一類含有醣基的黃素酶,被認為在癌症治療上深具潛力,其主要的細胞毒性源自於這些酵素與L-氨基酸基質進行反應時所產生的過氧化氫(H2O2)。然而,在svLAAO治療下,癌細胞除了被殺死之外,它是如何適應H2O2引起的氧化壓力,尚未被研究。在本研究中,我們純化且確認了來自Naja kaouthia毒液的svLAAO(NK-LAAO)的性質,同時研究人類肺腺癌A549細胞在NK-LAAO治療下的整體反應。親緣演化分析顯示svLAAOs分為兩個主要的演化支,即眼鏡蛇科和蝮蛇科的svLAAOs,其中NK-LAAO來自眼鏡蛇科svLAAOs,且與眼鏡蛇科Naja atra(NA-LAAO)的svLAAO最相關。此外,對svLAAOs活性位點相關殘基的分析結果顯示,在蝮蛇科svLAAOs中高度保守的His223,在眼鏡蛇科svLAAOs中則不高度保守,這是之前被提出具有酶活性的關鍵催化殘基。在結構上,NK-LAAO模型顯示為功能性二聚體,每個protomer由三個區域(基質結合區域,黃素腺嘌呤二核苷酸結合區域和螺旋區域)和三個潛在的N-連接醣化位點(N172、N194和N359)組成。NK-LAAO對疏水性L-氨基酸,如L-Trp、L-Met和L-Leu有顯著的基質偏好,對鹼性L-氨基酸L-Arg有適中的偏好,對酸性L-氨基酸L-Glu的特異性明顯較低。重要的是,NK-LAAO具有顯著的細胞毒性活性,依賴於培養基中的L-氨基酸組成,而不依賴於酵素表面的N-連接醣化,通過誘發A549癌細胞中的細胞外過氧化氫(H2O2)和細胞內活性氧(ROS)引起的細胞死亡。令人出乎意料,我們發現一種癌細胞部署的耐受機制,用以減緩NK-LAAO的抗癌活性。該酶的治療通過增加Pannexin 1(Panx1)驅動的細胞內鈣離子(iCa2+)升高,並活化PI3K/Akt信號傳導途徑,放大癌細胞的白細胞介素(IL)-6表達,使其能夠逃避氧化壓力誘導的細胞死亡,獲得上皮間葉轉化(EMT)樣的表現,並具有轉移能力。因此,shRNA介導的IL-6表達耗盡使癌細胞對NK-LAAO誘導的氧化壓力敏感,並抑制了NK-LAAO驅動的細胞遷移和侵襲。總而言之,我們的研究強調在使用svLAAOs進行癌症治療時需要謹慎,並建議以增強Panx1/iCa2+/IL-6軸作為提高svLAAOs基礎抗癌療法有效性的方法。
ABSTRACT
Snake venom L-amino acid oxidases (svLAAOs) are glycosylated flavoenzymes that have been proposed as promising candidates for anticancer therapeutics based on the primary cytotoxicity of hydrogen peroxide (H2O2) generated during reactions of the enzymes with their L-amino acid substrates. However, how cancer cells adapt to H2O2-induced oxidative stress other than to be killed under the context of svLAAO treatment has not been investigated. In this study, we purify and characterize the properties of a svLAAO from the Elapid snake Naja kaouthia venom (NK-LAAO), and comprehensively investigate the overall responses of human lung adenocarcinoma A549 cells under the treatment of NK-LAAO. Phylogenetic analysis reveals that svLAAOs split into two major clades of elapid and viperid svLAAOs, of which NK-LAAO arises from elapid svLAAOs and is the most closely related to the svLAAO from the Elapid snake Naja atra (NA-LAAO). In addition, analysis of the active site-related residues of svLAAOs uncovered that His223, a previously proposed critical catalytic residue for the enzyme activity, is highly conserved in the viperid but not the elapid svLAAOs. Structurally, the NK-LAAO model shows a functional dimer with each protomer consisting of three domains (substrate-binding, FAD-binding, and helical domains) and three putative N-linked glycosylation sites (N172, N194, and N359). NK-LAAO has a significantly high substrate preference for the hydrophobic L-amino acids L-Trp, L-Met, and L-Leu, a moderate preference for the basic L-amino acid L-Arg, and a significantly low specificity for the acidic L-amino acid L-Glu. Importantly, NK-LAAO exhibits substantial cytotoxic activity, which depends on the L-amino acid composition in the culture medium but not the N-linked glycans on the enzyme surface, by triggering extracellular hydrogen peroxide (H2O2)- and intracellular reactive oxygen species (ROS)-mediated cell death in A549 cancer cells. Unexpectedly, we explore a tolerant mechanism deployed by cancer cells to impair the anticancer activities of NK-LAAO. The treatment of the enzyme exaggerates interleukin (IL)-6 expression via increasing Pannexin 1 (Panx1)-driven intracellular calcium (iCa2+) elevation and activating the PI3K/Akt signaling pathway to enable cancer cells to evade oxidative stress-induced cell death, acquire epithelial-mesenchymal transition (EMT)-like phenotypes, and gain metastatic abilities. As a result, short hairpin (sh)RNA-mediated depletion of IL-6 expression sensitizes cancer cells to NK-LAAO-induced oxidative stress and inhibits NK-LAAO-driven cell migration and invasion. Taken together, our study urges caution when using svLAAOs in cancer treatment and suggests targeting the Panx1/iCa2+/IL-6 axis as an approach to enhance to improve the effectiveness of svLAAOs-based anticancer therapies.
REFERENCES
Abdelkafi-Koubaa Z, Jebali J, Othman H, Morjen M, Aissa I, Zouari-Kesentini R, Bazaa A, Ellefi AA, Majdoub H, Srairi-Abid N et al (2014) A thermoactive L-amino acid oxidase from Cerastes cerastes snake venom: purification, biochemical and molecular characterization. Toxicon 89: 32-44
Adams PD, Afonine PV, Bunkoczi G, Chen VB, Davis IW, Echols N, Headd JJ, Hung LW, Kapral GJ, Grosse-Kunstleve RW et al (2010) PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 66: 213-221
Akca H, Demiray A, Tokgun O, Yokota J (2011) Invasiveness and anchorage independent growth ability augmented by PTEN inactivation through the PI3K/AKT/NFkB pathway in lung cancer cells. Lung Cancer 73: 302-309
Alves RM, Antonucci GA, Paiva HH, Cintra AC, Franco JJ, Mendonca-Franqueiro EP, Dorta DJ, Giglio JR, Rosa JC, Fuly AL et al (2008) Evidence of caspase-mediated apoptosis induced by l-amino acid oxidase isolated from Bothrops atrox snake venom. Comp Biochem Physiol A Mol Integr Physiol 151: 542-550
Ande SR, Kommoju PR, Draxl S, Murkovic M, Macheroux P, Ghisla S, Ferrando-May E (2006) Mechanisms of cell death induction by L-amino acid oxidase, a major component of ophidian venom. Apoptosis 11: 1439-1451
Andrade-Silva D, Ashline D, Tran T, Lopes AS, Travaglia Cardoso SR, Reis MdS, Zelanis A, Serrano SMT, Reinhold V (2018) Structures of N-Glycans of Bothrops Venoms Revealed as Molecular Signatures that Contribute to Venom Phenotype in Viperid Snakes*. Molecular & Cellular Proteomics 17: 1261-1284
Bao L, Locovei S, Dahl G (2004) Pannexin membrane channels are mechanosensitive conduits for ATP. FEBS Lett 572: 65-68
Bedoya-Medina J, Mendivil-Perez M, Rey-Suarez P, Jimenez-Del-Rio M, Nunez V, Velez-Pardo C (2019) L-amino acid oxidase isolated from Micrurus mipartitus snake venom (MipLAAO) specifically induces apoptosis in acute lymphoblastic leukemia cells mostly via oxidative stress-dependent signaling mechanism. Int J Biol Macromol 134: 1052-1062
Bent EH, Millan-Barea LR, Zhuang I, Goulet DR, Frose J, Hemann MT (2021) Microenvironmental IL-6 inhibits anti-cancer immune responses generated by cytotoxic chemotherapy. Nat Commun 12: 6218
Biasini M, Bienert S, Waterhouse A, Arnold K, Studer G, Schmidt T, Kiefer F, Gallo Cassarino T, Bertoni M, Bordoli L, Schwede T (2014) SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information. Nucleic Acids Res 42: W252-258
Bregge-Silva C, Nonato MC, de Albuquerque S, Ho PL, Junqueira de Azevedo ILM, Vasconcelos Diniz MR, Lomonte B, Rucavado A, Díaz C, Gutiérrez JM, Arantes EC (2012) Isolation and biochemical, functional and structural characterization of a novel l-amino acid oxidase from Lachesis muta snake venom. Toxicon 60: 1263-1276
Butler M, van der Meer LT, van Leeuwen FN (2021) Amino Acid Depletion Therapies: Starving Cancer Cells to Death. Trends Endocrinol Metab 32: 367-381
Casewell NR, Jackson TNW, Laustsen AH, Sunagar K (2020) Causes and Consequences of Snake Venom Variation. Trends Pharmacol Sci 41: 570-581
Cerami E, Gao J, Dogrusoz U, Gross BE, Sumer SO, Aksoy BA, Jacobsen A, Byrne CJ, Heuer ML, Larsson E et al (2012) The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data. Cancer Discov 2: 401-404
Chan YS, Cheung RCF, Xia L, Wong JH, Ng TB, Chan WY (2016) Snake venom toxins: toxicity and medicinal applications. Appl Microbiol Biotechnol 100: 6165-6181
Chekeni FB, Elliott MR, Sandilos JK, Walk SF, Kinchen JM, Lazarowski ER, Armstrong AJ, Penuela S, Laird DW, Salvesen GS et al (2010) Pannexin 1 channels mediate ‘find-me’ signal release and membrane permeability during apoptosis. Nature 467: 863-867
Chen HS, Wang YM, Huang WT, Huang KF, Tsai IH (2012) Cloning, characterization and mutagenesis of Russell's viper venom L-amino acid oxidase: Insights into its catalytic mechanism. Biochimie 94: 335-344
Chiu YH, Jin X, Medina CB, Leonhardt SA, Kiessling V, Bennett BC, Shu S, Tamm LK, Yeager M, Ravichandran KS, Bayliss DA (2017) A quantized mechanism for activation of pannexin channels. Nat Commun 8: 14324
Cho KJ, Moon HE, Moini H, Packer L, Yoon DY, Chung AS (2003) Alpha-lipoic acid inhibits adipocyte differentiation by regulating pro-adipogenic transcription factors via mitogen-activated protein kinase pathways. J Biol Chem 278: 34823-34833
Chu Q, Zhu H, Liu B, Cao G, Fang C, Wu Y, Li X, Han G (2020) Delivery of amino acid oxidase via catalytic nanocapsules to enable effective tumor inhibition. J Mater Chem B 8: 8546-8557
Colovos C, Yeates TO (1993) Verification of protein structures: patterns of nonbonded atomic interactions. Protein Sci 2: 1511-1519
Conze D, Weiss L, Regen PS, Bhushan A, Weaver D, Johnson P, Rincon M (2001) Autocrine production of interleukin 6 causes multidrug resistance in breast cancer cells. Cancer Res 61: 8851-8858
Costa TR, Amstalden MK, Ribeiro DL, Menaldo DL, Sartim MA, Aissa AF, Antunes LMG, Sampaio SV (2018a) CR-LAAO causes genotoxic damage in HepG2 tumor cells by oxidative stress. Toxicology 404-405: 42-48
Costa TR, Carone SEI, Tucci LFF, Menaldo DL, Rosa-Garzon NG, Cabral H, Sampaio SV (2018b) Kinetic investigations and stability studies of two Bothrops L-amino acid oxidases. J Venom Anim Toxins Incl Trop Dis 24: 37
Costa TR, Menaldo DL, Prinholato da Silva C, Sorrechia R, de Albuquerque S, Pietro RC, Ghisla S, Antunes LM, Sampaio SV (2015) Evaluating the microbicidal, antiparasitic and antitumor effects of CR-LAAO from Calloselasma rhodostoma venom. Int J Biol Macromol 80: 489-497
Costa TR, Menaldo DL, Zoccal KF, Burin SM, Aissa AF, Castro FA, Faccioli LH, Greggi Antunes LM, Sampaio SV (2017) CR-LAAO, an L-amino acid oxidase from Calloselasma rhodostoma venom, as a potential tool for developing novel immunotherapeutic strategies against cancer. Sci Rep 7: 42673
Crespo Yanguas S, Willebrords J, Johnstone SR, Maes M, Decrock E, De Bock M, Leybaert L, Cogliati B, Vinken M (2017) Pannexin1 as mediator of inflammation and cell death. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research 1864: 51-61
Curti B, Massey V, Zmudka M (1968) Inactivation of snake venom L-amino acid oxidase by freezing. J Biol Chem 243: 2306-2314
DeLano WL (2002) Pymol: An open-source molecular graphics tool. CCP4 Newsl Protein Crystallogr 40: 82-92
Diniz-Sousa R, Caldeira C, Pereira SS, Da Silva SL, Fernandes PA, Teixeira LMC, Zuliani JP, Soares AM (2023) Therapeutic applications of snake venoms: An invaluable potential of new drug candidates. Int J Biol Macromol 238: 124357
Dongre A, Weinberg RA (2019) New insights into the mechanisms of epithelial–mesenchymal transition and implications for cancer. Nature Reviews Molecular Cell Biology 20: 69-84
Dumont A, Hehner SP, Hofmann TG, Ueffing M, Dröge W, Schmitz ML (1999) Hydrogen peroxide-induced apoptosis is CD95-independent, requires the release of mitochondria-derived reactive oxygen species and the activation of NF-κB. Oncogene 18: 747-757
Ebbing EA, van der Zalm AP, Steins A, Creemers A, Hermsen S, Rentenaar R, Klein M, Waasdorp C, Hooijer GKJ, Meijer SL et al (2019) Stromal-derived interleukin 6 drives epithelial-to-mesenchymal transition and therapy resistance in esophageal adenocarcinoma. Proc Natl Acad Sci U S A 116: 2237-2242
Faust A, Niefind K, Hummel W, Schomburg D (2007) The structure of a bacterial L-amino acid oxidase from Rhodococcus opacus gives new evidence for the hydride mechanism for dehydrogenation. J Mol Biol 367: 234-248
Feliciano PR, Rustiguel JK, Soares RO, Sampaio SV, Cristina Nonato M (2017) Crystal structure and molecular dynamics studies of L-amino acid oxidase from Bothrops atrox. Toxicon 128: 50-59
Fernandes HS, Silva Teixeira CS, Fernandes PA, Ramos MJ, Cerqueira NM (2017) Amino acid deprivation using enzymes as a targeted therapy for cancer and viral infections. Expert Opin Ther Pat 27: 283-297
Filiberto AC, Spinosa MD, Elder CT, Su G, Leroy V, Ladd Z, Lu G, Mehaffey JH, Salmon MD, Hawkins RB et al (2022) Endothelial pannexin-1 channels modulate macrophage and smooth muscle cell activation in abdominal aortic aneurysm formation. Nat Commun 13: 1521
Fitzpatrick PF (2004) Carbanion versus hydride transfer mechanisms in flavoprotein-catalyzed dehydrogenations. Bioorg Chem 32: 125-139
Fitzpatrick PF, Massey V (1982) Proton release during the reductive half-reaction of D-amino acid oxidase. J Biol Chem 257: 9958-9962
Furlow PW, Zhang S, Soong TD, Halberg N, Goodarzi H, Mangrum C, Wu YG, Elemento O, Tavazoie SF (2015) Mechanosensitive pannexin-1 channels mediate microvascular metastatic cell survival. Nat Cell Biol 17: 943-952
Gao JJ, Aksoy BA, Dogrusoz U, Dresdner G, Gross B, Sumer SO, Sun YC, Jacobsen A, Sinha R, Larsson E et al (2013) Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal. Sci Signal 6
Garcia-Echeverria C, Sellers WR (2008) Drug discovery approaches targeting the PI3K/Akt pathway in cancer. Oncogene 27: 5511-5526
Georgieva D, Murakami M, Perband M, Arni R, Betzel C (2011) The structure of a native l-amino acid oxidase, the major component of the Vipera ammodytes ammodytes venomic, reveals dynamic active site and quaternary structure stabilization by divalent ions. Molecular BioSystems 7: 379-384
Geueke B, Hummel W (2002) A new bacterial l-amino acid oxidase with a broad substrate specificity: purification and characterization. Enzyme and Microbial Technology 31: 77-87
Gocher AM, Azabdaftari G, Euscher LM, Dai S, Karacosta LG, Franke TF, Edelman AM (2017a) Akt activation by Ca2+/calmodulin-dependent protein kinase kinase 2 (CaMKK2) in ovarian cancer cells. Journal of Biological Chemistry 292: 14188-14204
Gocher AM, Azabdaftari G, Euscher LM, Dai S, Karacosta LG, Franke TF, Edelman AM (2017b) Akt activation by Ca(2+)/calmodulin-dependent protein kinase kinase 2 (CaMKK2) in ovarian cancer cells. J Biol Chem 292: 14188-14204
Guo C, Liu S, Dong P, Zhao D, Wang C, Tao Z, Sun MZ (2015) Akbu-LAAO exhibits potent anti-tumor activity to HepG2 cells partially through produced H2O2 via TGF-beta signal pathway. Sci Rep 5: 18215
Guo C, Liu S, Yao Y, Zhang Q, Sun MZ (2012) Past decade study of snake venom L-amino acid oxidase. Toxicon 60: 302-311
Gupta R, Brunak S (2002) Prediction of glycosylation across the human proteome and the correlation to protein function. Pac Symp Biocomput: 310-322
Hall BG (2013) Building phylogenetic trees from molecular data with MEGA. Mol Biol Evol 30: 1229-1235
Hanwell MD, Curtis DE, Lonie DC, Vandermeersch T, Zurek E, Hutchison GR (2012) Avogadro: an advanced semantic chemical editor, visualization, and analysis platform. J Cheminform 4: 17
He Y, Sun MM, Zhang GG, Yang J, Chen KS, Xu WW, Li B (2021) Targeting PI3K/Akt signal transduction for cancer therapy. Signal Transduct Target Ther 6: 425
Hennessy BT, Smith DL, Ram PT, Lu Y, Mills GB (2005) Exploiting the PI3K/AKT pathway for cancer drug discovery. Nat Rev Drug Discov 4: 988-1004
Hiu JJ, Yap MKK (2020) Cytotoxicity of snake venom enzymatic toxins: phospholipase A2 and l-amino acid oxidase. Biochem Soc Trans 48: 719-731
Hoffman RM, Kokkinakis DM, Frenkel EP (2019) Total Methionine Restriction Treatment of Cancer. Methods Mol Biol 1866: 163-171
Huang SC, Wu TC, Yu HC, Chen MR, Liu CM, Chiang WS, Lin KM (2010) Mechanical strain modulates age-related changes in the proliferation and differentiation of mouse adipose-derived stromal cells. BMC Cell Biol 11: 18
Huang YF, Aoki K, Akase S, Ishihara M, Liu YS, Yang G, Kizuka Y, Mizumoto S, Tiemeyer M, Gao XD et al (2021) Global mapping of glycosylation pathways in human-derived cells. Dev Cell 56: 1195-1209 e1197
Jeon H, Kim JH, Lee E, Jang YJ, Son JE, Kwon JY, Lim TG, Kim S, Park JH, Kim JE, Lee KW (2016) Methionine deprivation suppresses triple-negative breast cancer metastasis in vitro and in vivo. Oncotarget 7: 67223-67234
Jinesh GG, Brohl AS (2022) Classical epithelial-mesenchymal transition (EMT) and alternative cell death process-driven blebbishield metastatic-witch (BMW) pathways to cancer metastasis. Signal Transduct Target Ther 7: 296
Jo SM, Wurm FR, Landfester K (2020) Oncolytic Nanoreactors Producing Hydrogen Peroxide for Oxidative Cancer Therapy. Nano Lett 20: 526-533
Johnson DE, O'Keefe RA, Grandis JR (2018) Targeting the IL-6/JAK/STAT3 signalling axis in cancer. Nat Rev Clin Oncol 15: 234-248
Jones DT, Taylor WR, Thornton JM (1992) The rapid generation of mutation data matrices from protein sequences. Comput Appl Biosci 8: 275-282
Jones VS, Huang RY, Chen LP, Chen ZS, Fu L, Huang RP (2016) Cytokines in cancer drug resistance: Cues to new therapeutic strategies. Biochim Biophys Acta 1865: 255-265
Kang S, Tanaka T, Narazaki M, Kishimoto T (2019) Targeting Interleukin-6 Signaling in Clinic. Immunity 50: 1007-1023
Kang TS, Georgieva D, Genov N, Murakami MT, Sinha M, Kumar RP, Kaur P, Kumar S, Dey S, Sharma S et al (2011) Enzymatic toxins from snake venom: structural characterization and mechanism of catalysis. FEBS J 278: 4544-4576
Kasai K, Nakano M, Ohishi M, Nakamura T, Miura T (2021) Antimicrobial properties of L-amino acid oxidase: biochemical features and biomedical applications. Appl Microbiol Biotechnol 105: 4819-4832
Kishimoto M, Takahashi T (2001) A Spectrophotometric Microplate Assay for l-Amino Acid Oxidase. Analytical Biochemistry 298: 136-139
Kit S, Awapara J, Curnutte S (1953) Free Amino Acid Content and Transaminase Activity of Lymphatic Tissues and Lymphosarcomas*. Cancer Research 13: 694-698
Krieger E, Joo K, Lee J, Lee J, Raman S, Thompson J, Tyka M, Baker D, Karplus K (2009) Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8. Proteins 77 Suppl 9: 114-122
Laemmli UK (1970) Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4. Nature 227: 680-685
Laskowski RA, MacArthur MW, Moss DS, Thornton JM (1993) PROCHECK: a program to check the stereochemical quality of protein structures. Journal of Applied Crystallography 26: 283-291
Lazo F, Vivas-Ruiz DE, Sandoval GA, Rodriguez EF, Kozlova EEG, Costal-Oliveira F, Chavez-Olortegui C, Severino R, Yarleque A, Sanchez EF (2017) Biochemical, biological and molecular characterization of an L-Amino acid oxidase (LAAO) purified from Bothrops pictus Peruvian snake venom. Toxicon 139: 74-86
Letunic I, Bork P (2021) Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation. Nucleic Acids Res 49: W293-W296
Li Lee M, Chung I, Yee Fung S, Kanthimathi MS, Hong Tan N (2014) Antiproliferative activity of king cobra (Ophiophagus hannah) venom L-amino acid oxidase. Basic Clin Pharmacol Toxicol 114: 336-343
Liu H, Yuan M, Yao Y, Wu D, Dong S, Tong X (2019) In vitro effect of Pannexin 1 channel on the invasion and migration of I-10 testicular cancer cells via ERK1/2 signaling pathway. Biomed Pharmacother 117: 109090
Liu T, Zhang L, Joo D, Sun SC (2017) NF-kappaB signaling in inflammation. Signal Transduct Target Ther 2: 17023-
Liu W, Wang H, Bai F, Ding L, Huang Y, Lu C, Chen S, Li C, Yue X, Liang X et al (2020a) IL-6 promotes metastasis of non-small-cell lung cancer by up-regulating TIM-4 via NF-kappaB. Cell Prolif 53: e12776
Liu X, Shao Y, Zhou J, Qian G, Ma Z (2020b) Nuclear Factor kappaB Signaling and Its Related Non-coding RNAs in Cancer Therapy. Mol Ther Nucleic Acids 19: 208-217
López-Lázaro M (2007) Dual role of hydrogen peroxide in cancer: Possible relevance to cancer chemoprevention and therapy. Cancer Letters 252: 1-8
Mahalingaiah PKS, Singh KP (2014) Chronic Oxidative Stress Increases Growth and Tumorigenic Potential of MCF-7 Breast Cancer Cells. PLOS ONE 9: e87371
Marchi S, Giorgi C, Galluzzi L, Pinton P (2020) Ca(2+) Fluxes and Cancer. Mol Cell 78: 1055-1069
Mattevi A, Vanoni MA, Todone F, Rizzi M, Teplyakov A, Coda A, Bolognesi M, Curti B (1996) Crystal structure of D-amino acid oxidase: a case of active site mirror-image convergent evolution with flavocytochrome b2. Proc Natl Acad Sci U S A 93: 7496-7501
Medina CB, Mehrotra P, Arandjelovic S, Perry JSA, Guo Y, Morioka S, Barron B, Walk SF, Ghesquiere B, Krupnick AS et al (2020) Metabolites released from apoptotic cells act as tissue messengers. Nature 580: 130-135
Mitra J, Bhattacharyya D (2013) Irreversible inactivation of snake venom l-amino acid oxidase by covalent modification during catalysis of l-propargylglycine. FEBS Open Bio 3: 135-143
Molavian HR, Goldman A, Phipps CJ, Kohandel M, Wouters BG, Sengupta S, Sivaloganathan S (2016) Drug-induced reactive oxygen species (ROS) rely on cell membrane properties to exert anticancer effects. Sci Rep 6: 27439
Monteith GR, Prevarskaya N, Roberts-Thomson SJ (2017) The calcium-cancer signalling nexus. Nat Rev Cancer 17: 367-380
Morris GM, Huey R, Lindstrom W, Sanner MF, Belew RK, Goodsell DS, Olson AJ (2009) AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility. J Comput Chem 30: 2785-2791
Moustafa IM, Foster S, Lyubimov AY, Vrielink A (2006) Crystal structure of LAAO from Calloselasma rhodostoma with an L-phenylalanine substrate: insights into structure and mechanism. J Mol Biol 364: 991-1002
Murphy MP, Bayir H, Belousov V, Chang CJ, Davies KJA, Davies MJ, Dick TP, Finkel T, Forman HJ, Janssen-Heininger Y et al (2022) Guidelines for measuring reactive oxygen species and oxidative damage in cells and in vivo. Nat Metab 4: 651-662
Murray PJ (2016) Amino acid auxotrophy as a system of immunological control nodes. Nat Immunol 17: 132-139
Nakano S, Kozuka K, Minamino Y, Karasuda H, Hasebe F, Ito S (2020) Ancestral L-amino acid oxidases for deracemization and stereoinversion of amino acids. Communications Chemistry 3: 181
Narahari AK, Kreutzberger AJB, Gaete PS, Chiu Y-H, Leonhardt SA, Medina CB, Jin X, Oleniacz PW, Kiessling V, Barrett PQ et al (2021) ATP and large signaling metabolites flux through caspase-activated Pannexin 1 channels. eLife 10: e64787
Nikodijevic DD, Jovankic JV, Cvetkovic DM, Andelkovic MZ, Nikezic AG, Milutinovic MG (2021) L-amino acid oxidase from snake venom: Biotransformation and induction of apoptosis in human colon cancer cells. Eur J Pharmacol 910: 174466
Nishikawa M (2008) Reactive oxygen species in tumor metastasis. Cancer Lett 266: 53-59
Oliveira AL, Viegas MF, da Silva SL, Soares AM, Ramos MJ, Fernandes PA (2022) The chemistry of snake venom and its medicinal potential. Nature Reviews Chemistry
Panieri E, Santoro MM (2016) ROS homeostasis and metabolism: a dangerous liason in cancer cells. Cell Death Dis 7: e2253
Pasquesi GIM, Adams RH, Card DC, Schield DR, Corbin AB, Perry BW, Reyes-Velasco J, Ruggiero RP, Vandewege MW, Shortt JA, Castoe TA (2018) Squamate reptiles challenge paradigms of genomic repeat element evolution set by birds and mammals. Nat Commun 9: 2774
Pawelek PD, Cheah J, Coulombe R, Macheroux P, Ghisla S, Vrielink A (2000) The structure of L-amino acid oxidase reveals the substrate trajectory into an enantiomerically conserved active site. The EMBO Journal 19: 4204-4215
Pearson WR (2013) An introduction to sequence similarity ("homology") searching. Curr Protoc Bioinformatics Chapter 3: Unit3 1
Pelegrin P, Surprenant A (2006) Pannexin-1 mediates large pore formation and interleukin-1β release by the ATP-gated P2X7 receptor. The EMBO Journal 25: 5071-5082
Penuela S, Gyenis L, Ablack A, Churko JM, Berger AC, Litchfield DW, Lewis JD, Laird DW (2012) Loss of pannexin 1 attenuates melanoma progression by reversion to a melanocytic phenotype. J Biol Chem 287: 29184-29193
Perillo B, Di Donato M, Pezone A, Di Zazzo E, Giovannelli P, Galasso G, Castoria G, Migliaccio A (2020) ROS in cancer therapy: the bright side of the moon. Exp Mol Med 52: 192-203
Peyre L, Meyer M, Hofman P, Roux J (2021) TRAIL receptor-induced features of epithelial-to-mesenchymal transition increase tumour phenotypic heterogeneity: potential cell survival mechanisms. Br J Cancer 124: 91-101
Phan TTT, Lin YC, Chou YT, Wu CW, Lin LY (2022) Tumor suppressor p53 restrains cancer cell dissemination by modulating mitochondrial dynamics. Oncogenesis 11: 26
Pine MJ, Kim U, Ip C (1982) Free Amino Acid Pools of Rodent Mammary Tumors23. JNCI: Journal of the National Cancer Institute 69: 729-735
Pontes AS, Setúbal SdS, Nery NM, da Silva FS, da Silva SD, Fernandes CFC, Stábeli RG, Soares AM, Zuliani JP (2016) p38 MAPK is involved in human neutrophil chemotaxis induced by L-amino acid oxidase from Calloselasma rhodosthoma. Toxicon 119: 106-116
Post Y, Puschhof J, Beumer J, Kerkkamp HM, de Bakker MAG, Slagboom J, de Barbanson B, Wevers NR, Spijkers XM, Olivier T et al (2020) Snake Venom Gland Organoids. Cell 180: 233-247 e221
Pothukuchi P, Agliarulo I, Russo D, Rizzo R, Russo F, Parashuraman S (2019) Translation of genome to glycome: role of the Golgi apparatus. FEBS Lett 593: 2390-2411
Qing H, Desrouleaux R, Israni-Winger K, Mineur YS, Fogelman N, Zhang C, Rashed S, Palm NW, Sinha R, Picciotto MR et al (2020) Origin and Function of Stress-Induced IL-6 in Murine Models. Cell 182: 372-387.e314
Radisky DC, Levy DD, Littlepage LE, Liu H, Nelson CM, Fata JE, Leake D, Godden EL, Albertson DG, Nieto MA et al (2005) Rac1b and reactive oxygen species mediate MMP-3-induced EMT and genomic instability. Nature 436: 123-127
Ren J, Wen L, Gao X, Jin C, Xue Y, Yao X (2009) DOG 1.0: illustrator of protein domain structures. Cell Res 19: 271-273
Rey-Suarez P, Acosta C, Torres U, Saldarriaga-Cordoba M, Lomonte B, Nunez V (2018) MipLAAO, a new L-amino acid oxidase from the redtail coral snake Micrurus mipartitus. PeerJ 6: e4924
Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M, Chow W, Fungtammasan A, Kim J et al (2021) Towards complete and error-free genome assemblies of all vertebrate species. Nature 592: 737-746
Ribeiro PH, Zuliani JP, Fernandes CF, Calderon LA, Stabeli RG, Nomizo A, Soares AM (2016) Mechanism of the cytotoxic effect of l-amino acid oxidase isolated from Bothrops alternatus snake venom. Int J Biol Macromol 92: 329-337
Ricciardi M, Zanotto M, Malpeli G, Bassi G, Perbellini O, Chilosi M, Bifari F, Krampera M (2015) Epithelial-to-mesenchymal transition (EMT) induced by inflammatory priming elicits mesenchymal stromal cell-like immune-modulatory properties in cancer cells. Br J Cancer 112: 1067-1075
Riegel K, Yurugi H, Schloder J, Jonuleit H, Kaulich M, Kirschner F, Arnold-Schild D, Tenzer S, Schild H, Rajalingam K (2021) ERK5 modulates IL-6 secretion and contributes to tumor-induced immune suppression. Cell Death Dis 12: 969
Rodrigues RS, da Silva JF, Boldrini Franca J, Fonseca FP, Otaviano AR, Henrique Silva F, Hamaguchi A, Magro AJ, Braz AS, dos Santos JI et al (2009) Structural and functional properties of Bp-LAAO, a new L-amino acid oxidase isolated from Bothrops pauloensis snake venom. Biochimie 91: 490-501
Ruan Z, Orozco IJ, Du J, Lu W (2020) Structures of human pannexin 1 reveal ion pathways and mechanism of gating. Nature 584: 646-651
Salama WH, Ibrahim NM, El Hakim AE, Bassuiny RI, Mohamed MM, Mousa FM, Ali MM (2018) l-Amino acid oxidase from Cerastes vipera snake venom: Isolation, characterization and biological effects on bacteria and tumor cell lines. Toxicon 150: 270-279
Sanchez Arias JC, Wicki-Stordeur LE, Candlish RC, van der Slagt E, Paci I, Rao PPN, MacVicar BA, Swayne LA (2020) PANX1 in inflammation heats up: New mechanistic insights with implications for injury and infection. Cell Calcium 90: 102253
Savio LEB, Leite-Aguiar R, Alves VS, Coutinho-Silva R, Wyse ATS (2021) Purinergic signaling in the modulation of redox biology. Redox Biology 47: 102137
Sayedyahossein S, Huang K, Li Z, Zhang C, Kozlov AM, Johnston D, Nouri-Nejad D, Dagnino L, Betts DH, Sacks DB, Penuela S (2021) Pannexin 1 binds beta-catenin to modulate melanoma cell growth and metabolism. J Biol Chem 296: 100478
Schomburg I, Chang A, Schomburg D (2002) BRENDA, enzyme data and metabolic information. Nucleic Acids Research 30: 47-49
Shakin-Eshleman SH, Spitalnik SL, Kasturi L (1996) The Amino Acid at the X Position of an Asn-X-Ser Sequon Is an Important Determinant of N-Linked Core-glycosylation Efficiency (∗). Journal of Biological Chemistry 271: 6363-6366
Shi G, Liu C, Yang Y, Song L, Liu X, Wang C, Peng Z, Li H, Zhong L (2019) Panx1 promotes invasion-metastasis cascade in hepatocellular carcinoma. J Cancer 10: 5681-5688
Shibasaki T, Uki J, Kanoh T, Kawafuchi J-i (1979) Composition of free amino acids in brain tumors. Acta Neurologica Scandinavica 60: 301-311
Sillitoe I, Bordin N, Dawson N, Waman VP, Ashford P, Scholes HM, Pang CSM, Woodridge L, Rauer C, Sen N et al (2021) CATH: increased structural coverage of functional space. Nucleic Acids Res 49: D266-D273
Sistigu A, Di Modugno F, Manic G, Nistico P (2017) Deciphering the loop of epithelial-mesenchymal transition, inflammatory cytokines and cancer immunoediting. Cytokine Growth Factor Rev 36: 67-77
Sreenivasan L, Wang H, Yap SQ, Leclair P, Tam A, Lim CJ (2020) Autocrine IL-6/STAT3 signaling aids development of acquired drug resistance in Group 3 medulloblastoma. Cell Death Dis 11: 1035
Sullivan NJ, Sasser AK, Axel AE, Vesuna F, Raman V, Ramirez N, Oberyszyn TM, Hall BM (2009) Interleukin-6 induces an epithelial-mesenchymal transition phenotype in human breast cancer cells. Oncogene 28: 2940-2947
Suryamohan K, Krishnankutty SP, Guillory J, Jevit M, Schroder MS, Wu M, Kuriakose B, Mathew OK, Perumal RC, Koludarov I et al (2020) The Indian cobra reference genome and transcriptome enables comprehensive identification of venom toxins. Nat Genet 52: 106-117
Tamura K, Stecher G, Kumar S (2021) MEGA11: Molecular Evolutionary Genetics Analysis Version 11. Mol Biol Evol 38: 3022-3027
Tan KK, Bay BH, Gopalakrishnakone P (2018) L-amino acid oxidase from snake venom and its anticancer potential. Toxicon 144: 7-13
Tan KK, Ler SG, Gunaratne J, Bay BH, Ponnampalam G (2017a) In vitro cytotoxicity of L-amino acid oxidase from the venom of Crotalus mitchellii pyrrhus. Toxicon 139: 20-30
Tan KY, Tan CH, Chanhome L, Tan NH (2017b) Comparative venom gland transcriptomics of Naja kaouthia (monocled cobra) from Malaysia and Thailand: elucidating geographical venom variation and insights into sequence novelty. PeerJ 5: e3142
Tan N (1998) L-amino acid oxidases and lactate dehydrogenases. Enzymes from snake venom Fort Collins: Alaken Inc: 579-598
Tan NH, Saifuddin MN (1991) Substrate specificity of king cobra (Ophiophagus hannah) venom L-amino acid oxidase. Int J Biochem 23: 323-327
Taniguchi K, Karin M (2018) NF-kappaB, inflammation, immunity and cancer: coming of age. Nat Rev Immunol 18: 309-324
Tasoulis T, Isbister GK (2017) A Review and Database of Snake Venom Proteomes. Toxins (Basel) 9
Teufel F, Almagro Armenteros JJ, Johansen AR, Gíslason MH, Pihl SI, Tsirigos KD, Winther O, Brunak S, von Heijne G, Nielsen H (2022) SignalP 6.0 predicts all five types of signal peptides using protein language models. Nature Biotechnology 40: 1023-1025
Torii S, Naito M, Tsuruo T (1997) Apoxin I, a Novel Apoptosis-inducing Factor with L-Amino Acid Oxidase Activity Purified from Western Diamondback Rattlesnake Venom*. Journal of Biological Chemistry 272: 9539-9542
Truong NV, Phan TTT, Hsu TS, Phu Duc P, Lin LY, Wu WG (2023) Action mechanism of snake venom l-amino acid oxidase and its double-edged sword effect on cancer treatment: Role of pannexin 1-mediated interleukin-6 expression. Redox Biol 64: 102791
Ullah A (2020) Structure-Function Studies and Mechanism of Action of Snake Venom L-Amino Acid Oxidases. Front Pharmacol 11: 110
Umhau S, Pollegioni L, Molla G, Diederichs K, Welte W, Pilone Mirella S, Ghisla S (2000) The x-ray structure of d-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation. Proceedings of the National Academy of Sciences 97: 12463-12468
Urra FA, Araya-Maturana R (2022) Putting the brakes on tumorigenesis with snake venom toxins: New molecular insights for cancer drug discovery. Semin Cancer Biol 80: 195-204
Vanden Abeele F, Bidaux G, Gordienko D, Beck B, Panchin YV, Baranova AV, Ivanov DV, Skryma R, Prevarskaya N (2006) Functional implications of calcium permeability of the channel formed by pannexin 1. J Cell Biol 174: 535-546
Wallace AC, Laskowski RA, Thornton JM (1995) LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng 8: 127-134
Wei XL, Wei JF, Li T, Qiao LY, Liu YL, Huang T, He SH (2007) Purification, characterization and potent lung lesion activity of an L-amino acid oxidase from Agkistrodon blomhoffii ussurensis snake venom. Toxicon 50: 1126-1139
Wei YS, Chang YR, Tsai YT, Yang YT, Weng SH, Tseng LF, Chou HC, Hu AT, Liao EC, Chen HY et al (2021) The distribution of cultivable oral anaerobic microbiota identified by MALDI-TOF MS in healthy subjects and in patients with periodontal disease. J Pharm Biomed Anal 192: 113647
Wiezel GA, Rustiguel JK, Morgenstern D, Zoccal KF, Faccioli LH, Nonato MC, Ueberheide B, Arantes EC (2019) Insights into the structure, function and stability of bordonein-L, the first L-amino acid oxidase from Crotalus durissus terrificus snake venom. Biochimie 163: 33-49
Williams CJ, Headd JJ, Moriarty NW, Prisant MG, Videau LL, Deis LN, Verma V, Keedy DA, Hintze BJ, Chen VB et al (2018) MolProbity: More and better reference data for improved all-atom structure validation. Protein Sci 27: 293-315
Wong L (2012) A short introduction to some recent progress in phylogenetic network reconstruction, genome mapping, gene expression analysis, molecular dynamic simulation, and other problems in bioinformatics. J Bioinform Comput Biol 10: 1203002
Xiao F, Wang C, Yin H, Yu J, Chen S, Fang J, Guo F (2016) Leucine deprivation inhibits proliferation and induces apoptosis of human breast cancer cells via fatty acid synthase. Oncotarget 7: 63679-63689
Xiao Y, Li X, Cui Y, Zhang J, Liu L, Xie X, Hao H, He G, Kander MC, Chen M et al (2014) Hydrogen peroxide inhibits proliferation and endothelial differentiation of bone marrow stem cells partially via reactive oxygen species generation. Life Sciences 112: 33-40
Yang J, Antin P, Berx G, Blanpain C, Brabletz T, Bronner M, Campbell K, Cano A, Casanova J, Christofori G et al (2021) Author Correction: Guidelines and definitions for research on epithelial-mesenchymal transition. Nat Rev Mol Cell Biol 22: 834
Yang Y, Delalio LJ, Best AK, Macal E, Milstein J, Donnelly I, Miller AM, McBride M, Shu X, Koval M et al (2020a) Endothelial Pannexin 1 Channels Control Inflammation by Regulating Intracellular Calcium. J Immunol 204: 2995-3007
Yang Y, Delalio LJ, Best AK, Macal E, Milstein J, Donnelly I, Miller AM, McBride M, Shu X, Koval M et al (2020b) Endothelial Pannexin 1 Channels Control Inflammation by Regulating Intracellular Calcium. The Journal of Immunology 204: 2995-3007
Yi L, Shen H, Zhao M, Shao P, Liu C, Cui J, Wang J, Wang C, Guo N, Kang L et al (2017) Inflammation-mediated SOD-2 upregulation contributes to epithelial-mesenchymal transition and migration of tumor cells in aflatoxin G1-induced lung adenocarcinoma. Sci Rep 7: 7953
Zainal Abidin SA, Rajadurai P, Chowdhury MEH, Ahmad Rusmili MR, Othman I, Naidu R (2018) Cytotoxic, Antiproliferative and Apoptosis-inducing Activity of L-Amino Acid Oxidase from Malaysian Calloselasma rhodostoma on Human Colon Cancer Cells. Basic Clin Pharmacol Toxicol 123: 577-588
Zeitler L, Fiore A, Meyer C, Russier M, Zanella G, Suppmann S, Gargaro M, Sidhu SS, Seshagiri S, Ohnmacht C et al (2021) Anti-ferroptotic mechanism of IL4i1-mediated amino acid metabolism. Elife 10
Zhang H, Teng M, Niu L, Wang Y, Wang Y, Liu Q, Huang Q, Hao Q, Dong Y, Liu P (2004) Purification, partial characterization, crystallization and structural determination of AHP-LAAO, a novel L-amino-acid oxidase with cell apoptosis-inducing activity from Agkistrodon halys pallas venom. Acta Crystallogr D Biol Crystallogr 60: 974-977
Zhang M, Jang H, Gaponenko V, Nussinov R (2017) Phosphorylated Calmodulin Promotes PI3K Activation by Binding to the SH(2) Domains. Biophys J 113: 1956-1967