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研究生: 曹淮宇
Chao, Huai-Yu
論文名稱: 同調光繞射顯微術相位回復演算法之速度優化及於斷層掃描影像重建的應用
Acceleration of Phase Retrieval Algorithms for Coherent Diffraction Imaging and Their Application in Tomographic Reconstruction
指導教授: 陳健群
Chen, Chien-Chun
口試委員: 蘇紘儀
Su, Hong-Yi
侯敦暉
Hou, Dun-Hui
學位類別: 碩士
Master
系所名稱: 理學院 - 先進光源科技學位學程
Degree Program of Science and Technology of Synchrotron Light Source
論文出版年: 2023
畢業學年度: 111
語文別: 中文
論文頁數: 24
中文關鍵詞: 同調X光繞射混合輸入輸出法掃描穿透式電子顯微鏡斷層影像重建
外文關鍵詞: CDI, HIO, STEM, tomography reconstruction
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  •   在同步輻射光源的持續發展下,同調光繞射顯微術(Coherent Diffraction
    Imaging,簡稱 CDI)能夠重建非結晶樣品的結構以供更深入的研究,是一種相當實用的檢測技術。其所使用的重建演算法(Hybrid Input Output Algorithm,簡稱 HIO)由於同時利用了實空間與倒空間的資訊來進行迭代,因此能夠較為精確的重建樣品的結構資訊。
      本論文分為兩個部分,第一部分是在 Matlab 環境下對 HIO 算法及其優化版本 GHIO 算法進行優化,大幅降低其重建過程所需花費的時間,並以實例說明優化後的版本在相關研究中能提供大量的幫助,讓研究人員更專注於理論的正確性及實驗的技術提升。
      第二部分是將 HIO 應用於進行三維斷層影像的重建,利用 HIO 算法的特性,我們可以獲得相當精準的重建結果。也透過與其他常用的重建算法(FBP 及 ART)比較,說明 HIO 對於投影角度及數量的缺失,以及實驗過程中的雜訊都有相當高的容忍度,非常適合用於高解析度的 STEM 斷層影像的重建。


    With the continuous development of synchrotron radiation sources, Coherent Diffraction Imaging (CDI) has become a practical and valuable technique for reconstructing the structures of non-crystalline samples, enabling deeper research insights. The reconstruction algorithm used in CDI, known as the Hybrid Input Output Algorithm (HIO), leverages both real and reciprocal space information during iterations, resulting in more accurate reconstruction of sample structures.
    This paper is divided into two parts. The first part focuses on optimizing the HIO algorithm and its improved version, GHIO, in the Matlab environment, significantly reducing the reconstruction time. Examples demonstrate how the optimized version can offer substantial assistance in related research, allowing researchers to concentrate more on theoretical correctness and experimental enhancements.
    In the second part, we apply the HIO algorithm to perform three-dimensional tomographic image reconstruction. Exploiting the characteristics of the HIO algorithm, we achieve highly accurate reconstruction results. Comparisons with other commonly used reconstruction algorithms (FBP and ART) reveal HIO's high tolerance to missing projection angles and quantities, as well as experimental noise, making it particularly suitable for high-resolution STEM tomographic image reconstruction.

    摘要 ······················································· i Abstract ··················································· ii 目錄 ······················································· iii 表目錄 ····················································· v 圖目錄 ····················································· vi 第一章 HIO 及 GHIO 的速度優化 ······························ 1 1.1 前言 ··················································· 1 1.2 相位問題及相位回復演算法 ······························· 2 1.2.1 相位問題 ············································· 2 1.2.2 Hybrid Input Output Algorithm (HIO) ·················· 2 1.2.3 Guided Hybrid Input Output Algorithm (GHIO) ·········· 3 1.3 優化技術 ··············································· 5 1.3.1 使用 GPU 加速 HIO ···································· 5 1.3.2 透過多核平行計算加速 GHIO ···························· 8 1.4 結果與討論 ············································· 11 第二章 將相位回復演算法應用於重建斷層影像 ·················· 12 2.1 前言 ··················································· 12 2.2 重建流程 ··············································· 13 2.2.1 獲取投影 ············································· 13 2.2.2 獲取倒空間數據········································ 13 2.2.3 調整 HIO 以進行重組 ·································· 16 2.3 結果與討論 ············································· 17 第三章 結論 ················································ 22 參考文獻 ··················································· 23

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