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研究生: 黃郁芬
Huang, Yu-Fen
論文名稱: 酵母菌異質表現液泡焦磷酸水解酶之蛋白調控機制
Protein regulation of vacuolar H+-pyrophosphatase heterologously expressed in yeast
指導教授: 潘榮隆
Pan, Rong-Long
口試委員: 張晃猷
劉姿吟
潘羿娟
黃蘊慈
學位類別: 博士
Doctor
系所名稱: 生命科學暨醫學院 - 生物資訊與結構生物研究所
Institute of Bioinformatics and Structural Biology
論文出版年: 2018
畢業學年度: 106
語文別: 英文
論文頁數: 62
中文關鍵詞: 焦磷酸水解酶磷酸化作用
外文關鍵詞: H+-pyrophosphatase, phosphorylation
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  • 質子傳送焦磷酸水解酶是一能維持細胞質內pH恆定的獨特酵素,並藉由水解焦磷酸建立跨生物膜的質子梯度。磷酸化作用隸屬於蛋白質轉譯後修飾的一種,在調控機制中扮演重要的角色。在現階段酵母菌異質體表現綠豆焦磷酸水解酶的研究中,利用Pro-Q 鑽石染漬法發現,焦磷酸水解酶具有磷酸化作用;利用質譜分析法,發現絲胺酸45為磷酸化的位置。除此之外,發現利用酪蛋白激酶2抑制劑,能抑制絲胺酸45的磷酸化作用;第二型蛋白磷酸酶能抑制焦磷酸水解酶的磷酸化作用。綜觀以上結果,提供新的證據顯示酪蛋白激酶2及第二型蛋白磷酸酶,參與調控酵母菌異質表現焦磷酸水解酶磷酸化與去磷酸化作用。


    H+-translocating pyrophosphatase (H+-PPases) is a unique enzyme implicated in the cellular pH homeostasis that develops an electrochemical H+ gradient across the membrane through pyrophosphate (PPi) hydrolysis. Phosphorylation is one of the posttranslational modifications (PTMs) of proteins and is considered a regulatory mechanism. In this study, the possible phosphorylation of the Vigna radiata H+-PPases (VrH+-PPases) isolated from the yeast heterologous expression system was revealed for the first time by using the Pro-Q Diamond staining. Furthermore, a phosphorylation site was identified at Ser45 of VrH+-PPases through mass spectroscopy. In addition, the application of casein kinase 2 (CK2) inhibitors resulted in the inhibition of phosphorylation of VrH+-PPases in yeast. Phosphorylation at Ser45 also enhanced the ion effects on VrH+-PPase. On the contrary, the type 2C protein phosphatase (PP2C) was able to dephosphorylate the VrH+-PPase obtained from heterologously expressing yeast. Our study provides new evidence for possible role of CK2 and PP2C in the kinase/phosphatase regulation of VrH+-PPases.

    Abbreviations 1 Introduction 3 Experimental Procedures 8 Isolation of microsomes and purification of VrH+-PPase from yeast heterologous expression system 8 SDS-PAGE and Western blot analysis 10 Phosphoprotein staining of SDS-PAGE gels 11 Destaining and in-gel digestion for mass spectrometric analysis 12 Mass spectrometric analysis 13 Protein database searching 14 Enzymatic activity assays of VrH+-PPase 15 Determination of PPi -dependent H+ translocation 16 Inhibition of intrinsic phosphorylation of VrH+-PPase in yeast heterologous expression system 17 Results 18 Phosphorylation of VrH+-PPases heterologously expressed in yeast 18 Characterization of VrH+-PPases phosphorylated sites 20 Inhibition of phosphorylation of VrH+-PPases by casein kinase 2 inhibitor 20 Ion effects on phosphorylated and dephosphorylated VrH+-PPases 23 Dephosphorylation of VrH+-PPases by type 2C protein phosphatase 25 Discussion 27 References 32 Figures 47 Figure 1. Phosphorylation of VrH+-PPases in yeast visualized using Pro-Q Diamond phosphoprotein stain 47 Figure 2. Serine 45 is the phosphorylation site as determined by LC/MS–MS. 48 Figure 3. Topological model and the multiple sequence alignment of VrH+-PPase 49 Figure 4. Effects of diverse kinase inhibitors on phosphorylation of VrH+-PPase 51 Figure 5. Inhibition on phosphorylation of VrH+-PPase in yeast by casein kinase 2 inhibitor 53 Figure 6. Ion effects on VrH+-PPase isolated from heterologously expressing yeasts 56 Figure 7. Dephosphorylation of Ser45 on VrH+-PPase isolated from heterologously expressing yeasts by PP2C 57 Figure 8. Proposed schemes for regulation of the proton-pumping systems, V-ATPase and VrH+-PPase on plant tonoplasts via phosphorylation and dephosphorylation. 59 Appendix 61 Table S1. List of the putative kinases inhibitors toward RXXS motif and theirs inhibitors. 61 Figure S1. The MS/MS spectrum of 38-LSAVRDAS#PNAAAK-51. 62

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