研究生: |
黃湘芸 Huang, Hsiang-Yun |
---|---|
論文名稱: |
親和螢光增益探針於蛋白質偵測之應用 Affinity-Based Fluorescent Turn-On Chemical Probes for Protein Detection |
指導教授: |
陳貴通
Tan, Kui-Thong |
口試委員: |
黃郁棻
Huang, Yu-Fen 許馨云 Hsu, Hsin-Yun |
學位類別: |
碩士 Master |
系所名稱: |
理學院 - 化學系 Department of Chemistry |
論文出版年: | 2019 |
畢業學年度: | 107 |
語文別: | 中文 |
論文頁數: | 175 |
中文關鍵詞: | 螢光增益探針 、蛋白質偵測 、二氟苯酚 、親和取代 |
外文關鍵詞: | fluorogenic probe, protein-activated, difluorophenyl pivalate chemistry, protein detection |
相關次數: | 點閱:3 下載:0 |
分享至: |
查詢本校圖書館目錄 查詢臺灣博碩士論文知識加值系統 勘誤回報 |
螢光增益探針由於能快速且靈敏地偵測目標分析物,使此類型探針在生物與醫學研究上逐漸受到重視。近年來,許多螢光分子被用來偵測酶蛋白,透過酶的催化反應使探針中的非螢光基團受質結構改變以產生螢光訊號。然而,因非酶蛋白不具催化能力,發展快速偵測非酶蛋白的螢光增益探針仍有諸多限制。本論文發展出新型的蛋白質偵測策略,藉由在探針中引入二氟苯酚作為反應基團以增加探針反應性。當加入目標蛋白後,蛋白質表面的胺基酸殘基和探針中的反應基團進行親核取代反應後斷鍵,再經由自解離機制釋放出螢光基團,依螢光訊號改變量來達到偵測目的。本論文成功以人體碳酸酐酶 (hCA) 及抗生物素蛋白 (avidin) 作為此概念的展示。此種檢測方式具有普遍性,只需更換蛋白質所對應的配體即可檢測不同蛋白質,另外,此類探針具有高選擇性與高靈敏度的優點,且能夠快速檢測,極具有應用潛力。
Currently, most of the fluorogenic probes are designed for the detection of enzymes which work by converting the non-fluorescence substrate into the fluorescence product via an enzymatic reaction. On the other hand, the design of fluorogenic probes for non-enzymatic proteins remains a great challenge. Herein, we report a general strategy to create protein-activated fluorogenic probes based on difluorophenyl pivalate chemistry. In this approach, difluorophenyl pivalate will act as a reactive moiety in which the binding of the target protein would attack the reactive group to trigger fluorescence enhancement. This difluorophenyl pivalate chemistry allows us to study different proteins by changing specific ligand such as biotin and benzenesulfonamide. We expect that this novel protein detection method will be useful for rapid fundamental research and disease diagnosis.
1. Sandilands, A.; Sutherland, C.; Irvine, A. D.; McLean, W. H. I. J. Cell Sci. 2009, 122, 1285-1294.
2. Chesebro, B. Br. Med. Bull. 2003, 66, 1.
3. Brown, P.; Will, R. G.; Bradley, R.; Asher, D. M.; Detwiler, L. Emerg Infect Dis 2001, 7, 6.
4. Scott, M. R.; Will, R.; Ironside, J.; Nguyen, H.-O. B.; Tremblay, P.; DeArmond, S. J.; Prusiner, S. B. Proc. Natl. Acad. Sci., U.S.A. 1999, 96, 15137.
5. Prusiner, S. B. Proc. Natl Acad. Sci., U.S.A. 1998, 95, 13363.
6. Schomburg, I.; Chang, A.; Placzek, S.; Söhngen, C.; Rother, M.; Lang, M.; Munaretto, C.; Ulas, S.; Stelzer, M.; Grote, A.; Scheer, M.; Schomburg, D. Nucleic Acids Res. 2012, 41, D764.
7. Ridker, P. M. Circulation 2003, 108, e81.
8. Fenn, J.; Mann, M.; Meng, C.; Wong, S.; Whitehouse, C. M. Science 1989, 246, 64.
9. Karas, M.; Bachmann, D.; Hillenkamp, F. Anal. Chem. 1985, 57, 2935.
10. Aebersold, R.; Goodlett, D. R. Chem. Rev. 2001, 101, 269.
11. Gstaiger, M.; Aebersold, R. Nat. Rev. Genet. 2009, 10, 617.
12. Diagnostics, C.
https://www.creative-diagnostics.com/ELISA-guide.htm.
13. Science, M. L. http://ruo.mbl.co.jp/bio/e/support/method/westernblotting.html.
14. Kamiya, M.; Asanuma, D.; Kuranaga, E.; Takeishi, A.; Sakabe, M.; Miura, M.; Nagano, T.; Urano, Y. J. Am. Chem. Soc. 2011, 133, 12960.
15. Hanigan, M. H.; Frierson, H. F.; Brown, J. E.; Lovell, M. A.; Taylor, P. T. Cancer Res. 1994, 54, 286.
16. Yao, D.; Jiang, D.; Huang, Z.; Lu, J.; Tao, Q.; Yu, Z.; Meng, X. Cancer 2000, 88, 761.
17. Urano, Y.; Sakabe, M.; Kosaka, N.; Ogawa, M.; Mitsunaga, M.; Asanuma, D.; Kamiya, M.; Young, M. R.; Nagano, T.; Choyke, P. L.; Kobayashi, H. Sci. Transl. Med. 2011, 3, 110ra119.
18. Broussard, J. A.; Rappaz, B.; Webb, D. J.; Brown, C. M. Nat. Protoc. 2013, 8, 265.
19. Myochin, T.; Hanaoka, K.; Komatsu, T.; Terai, T.; Nagano, T. J. Am. Chem. Soc. 2012, 134, 13730.
20. Ren, C.; Zhang, J.; Chen, M.; Yang, Z. Chem. Soc. Rev. 2014, 43, 7257.
21. Whitesides, G. M.; Boncheva, M. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 4769.
22. Mizusawa, K.; Takaoka, Y.; Hamachi, I. J. Am. Chem. Soc. 2012, 134, 13386.
23. Yoshii, T.; Mizusawa, K.; Takaoka, Y.; Hamachi, I. J. Am. Chem. Soc. 2014, 136, 16635.
24. Hou, T.-C.; Wu, Y.-Y.; Chiang, P.-Y.; Tan, K.-T. Chem. Sci. 2015, 6, 4643.
25. Yang, Z.; Cao, J.; He, Y.; Yang, J. H.; Kim, T.; Peng, X.; Kim, J. S. Chem. Soc. Rev. 2014, 43, 4563.
26. Loving, G. S.; Sainlos, M.; Imperiali, B., Trends Biotechnol. 2010, 28, 73.
27. Klymchenko, A. S. Acc. Chem. Res. 2017, 50, 366.
28. Liu, T.-K.; Hsieh, P.-Y.; Zhuang, Y.-D.; Hsia, C.-Y.; Huang, C.-L.; Lai, H.-P.; Lin, H.-S.; Chen, I. C.; Hsu, H.-Y.; Tan, K.-T. ACS Chem. Biol. 2014, 9, 2359.
29. Jia, T.; Fu, C.; Huang, C.; Yang, H.; Jia, N. ACS Appl. Mater. Interfaces 2015, 7, 10013.
30. Haidekker, M. A.; Theodorakis, E. A. Org. Biomol. Chem. 2007, 5, 1669.
31. Hu, R.; Lager, E.; Aguilar-Aguilar, A.; Liu, J.; Lam, J. W. Y.; Sung, H. H. Y.; Williams, I. D.; Zhong, Y.; Wong, K. S.; Peña-Cabrera, E.; Tang, B. Z. J. Phys. Chem. C 2009, 113, 15845.
32. Sasaki, S.; Drummen, G. P. C.; Konishi, G. J. Mater. Chem. C 2016, 4, 2731.
33. Haidekker, M. A.; Theodorakis, E. A. J. Biol. Eng. 2010, 4, 11.
34. Drummen, G. P. C. Molecules 2012, 17, 14067.
35. Tesch, G. H. Nephrology 2010, 15, 609.
36. Wu, Y.-Y.; Yu, W.-T.; Hou, T.-C.; Liu, T.-K.; Huang, C.-L.; Chen, I. C.; Tan, K.-T. Chem. Commun. 2014, 50, 11507.
37. Reja, S. I.; Khan, I. A.; Bhalla, V.; Kumar, M. Chem. Commun. 2016, 52, 1182.
38. Yan, J.; Lee, S.; Zhang, A.; Yoon, J. Chem. Soc. Rev. 2018, 47, 6900.
39. Zhang, H.; Xu, C.; Liu, J.; Li, X.; Guo, L.; Li, X. Chem. Commun. 2015, 51 , 7031.
40. Han, J.; Tao, F.-M. J. Phys. Chem. A 2006, 110, 257.
41. Supuran, C. T., Nat. Rev. Drug Discovery 2008, 7, 168.
42. Alterio, V.; Di Fiore, A.; D’Ambrosio, K.; Supuran, C. T.; De Simone, G. Chem. Rev. 2012, 112, 4421.
43. Watson, P. H.; Chia, S. K.; Wykoff, C. C.; Han, C.; Leek, R. D.; Sly, W. S.; Gatter, K. C.; Ratcliffe, P.; Harris, A. L. Br. J. Cancer 2003, 88, 1065.
44. Hui, E. P.; Chan, A. T. C.; Pezzella, F.; Turley, H.; To, K.-F.; Poon, T. C. W.; Zee, B.; Mo, F.; Teo, P. M. L.; Huang, D. P.; Gatter, K. C.; Johnson, P. J.; Harris, A. L. Clin. Cancer Res. 2002, 8, 2595.
45. Wykoff, C. C.; Beasley, N. J. P.; Watson, P. H.; Turner, K. J.; Pastorek, J.; Sibtain, A.; Wilson, G. D.; Turley, H.; Talks, K. L.; Maxwell, P. H.; Pugh, C. W.; Ratcliffe, P. J.; Harris, A. L. Cancer Res. 2000, 60, 7075.
46. Chiche, J.; Ilc, K.; Laferrière, J.; Trottier, E.; Dayan, F.; Mazure, N. M.; Brahimi-Horn, M. C.; Pouysségur, J. Cancer Res. 2009, 69, 358.
47. Diamandis, E. P.; Christopoulos, T. K. Clin. Chem. 1991, 37, 625.