研究生: |
李育安 Li, Yu-An |
---|---|
論文名稱: |
藉年齡分層資料分析傳染性疾病潛在傳播: 以臺灣登革熱為例 Estimated potential infection risk from age-stratified data: An empirical study of dengue in Taiwan. |
指導教授: |
張筱涵
Chang, Hsiao-Han |
口試委員: |
李政昇
Lee, Cheng-Sheng 鄒小蕙 Tsou, Hsiao-Hui |
學位類別: |
碩士 Master |
系所名稱: |
生命科學暨醫學院 - 生物資訊與結構生物研究所 Institute of Bioinformatics and Structural Biology |
論文出版年: | 2021 |
畢業學年度: | 109 |
語文別: | 中文 |
論文頁數: | 52 |
中文關鍵詞: | 年齡分層資料 、最佳化 、登革熱 |
外文關鍵詞: | Age-stratified data, optimize, dengue |
相關次數: | 點閱:2 下載:0 |
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至目前為止,傳染性疾病監測系統多以所通報之確診病例或感染發生率評 估疫情,然而在面對無症狀與輕症感染居多的疾病時,由於許多患者未被計入 確診病例,容易因未計算到疾病的潛在傳播,而低估了疫情真正的嚴重性。
對於長期盛行的傳染性疾病而言,不同年齡層的人群因所經歷的年代不 同,加上疾病感染力隨時間的變化,而有不同的感染比例。另一方面,不同的 感染比例,亦代表不同年齡層人群因過去感染疾病,而對其具免疫力的比例有 所差異。本研究透過年齡分層資料建立統計模型,分別使用貝葉斯方法與最佳 化演算法進行估計,來量化疾病的感染力以推估疫情實際的盛行情況。
本研究將此方法應用在臺灣登革熱上,在第一部分使用年齡分層感染發生 率資料,計算登革熱在大流行時期與其他時期的平均感染力,並推估登革熱在 人群的盛行率及感染通報率。本研究的結果與國內多個血清學的研究結果一 致,且更進一步提供了探討不同地區疫情長期變化的方法。第二部分則著重於 規劃大規模的登革熱血清學研究,以電腦模擬的方式探討在可取得資料的年齡 分佈下,不同樣本數對估計疾病感染力的能力;並藉由聚集性的人潮流動資 料,探討考慮地區間的人潮流動對準確評估疫情的重要性。這部分研究除了能 更有效率的分配不同地區所需採樣數,並能校正在一般血清學研究忽略的人潮 流動。綜上所述,本研究將年齡分層的分析方法應用在感染發生率或是血清學 資料上,對評估疫情長期變化提供較穩健的結果,且說明了人潮流動對評估各 區疫情的重要性。
Currently, infectious disease surveillance systems usually assess the risk of infectious diseases based on the number of confirmed cases or incidence rate. However, for infectious diseases with many asymptomatically or mildly symptomatic infections, the transmission intensity of infectious diseases is likely underestimated and the potential transmission chains are likely missed because these infections are usually not captured by the surveillance system.
For infectious diseases that have been prevalent for a long period of time, the infection rates differ between age groups because they experience different years of transmission, and the transmission intensity changes through time. On the other hand, the different infection rates in different age groups also represent the difference in their proportions of people who are immune to the disease due to past infections. In this study, age-specific statistical models were developed to quantify the transmission intensity of infectious diseases and estimate the actual prevalence, and the parameters in the models were estimated using either Bayesian method or optimization algorithms.
We applied this method to dengue data in Taiwan. In the first part, we used age stratified incidence data to estimate the force of infection (FOI) of dengue during bigger outbreak years and other periods, followed by estimating the prevalence and reporting rate of dengue. The results are consistent with other serological studies in Taiwan, and further provide an approach to examine the long-term transmission intensity in different cities. The second part of the thesis focuses on designing a large scale serological study of dengue. I used computer simulations to investigate the impact of sample size on the ability to estimate the force of infection of the disease given the age distribution of the available data, as well as make use of the aggregated human mobility data in Taiwan to assess the importance of considering intercity movements on the estimation of transmission intensity. This part of the study not only provides insights into the allocation of sample size across regions, but also corrects for human mobility, which has been neglected in other studies. Overall, this study applied age-stratified methods to incidence and serological data, providing more robust estimates of long-term changes in the transmission intensity and demonstrating the importance of incorporating human movements when estimating transmission intensity in multiple regions.
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