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研究生: 白諦
Patil Pratap Subhashrao
論文名稱: Synthesis of Mycobacterial Phosphatidylinositol Mannosides
指導教授: 洪上程
Hung, Shang-Cheng
廖文峯
Liaw, Wen-Fen
口試委員:
學位類別: 博士
Doctor
系所名稱: 理學院 - 化學系
Department of Chemistry
論文出版年: 2011
畢業學年度: 99
語文別: 英文
論文頁數: 440
中文關鍵詞: 肌醇甘露糖
外文關鍵詞: Mycobacteria, Phosphatidylinositol mannoside, myo-inositol, tuberculosis, one-pot protection, tetraacylated PIM6
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  • Phosphatidylinositol mannosides (PIMs) are ubiquitously distributed in both
    pathogenic and non-pathogenic species of mycobacteria and play significant roles in cell
    wall biogenesis and in many immunomodulatory events including phagocytosis of
    organism. Different structures of PIMs impact the recognition and response of the host
    cell and influence the intercellular fate of pathogen. Owing to the structural complexity,
    the biosynthetic pathway of PIMs remains unclear. In order to understand a biosynthesis
    and establish detailed structure-activity relationship, chemical synthesis of PIMs is
    considered as one of the most practical way to obtain the pure and structurally verified
    molecules at considerable scale. In addition, due to their role in various immunological
    events, PIMs could act as potential immunotherapeutics. Thus, this dissertation describes
    the preparation of PIMs and the resolution to the difficulties encountered during the
    synthesis.
    Chapter 1 gives an overview of tuberculosis, Mycobacterium tuberculosis, and the
    structural components of mycobacterial cell wall in the beginning. Furthermore,
    structural characterization of PIMs and their biological properties is illustrated to provide
    a deeper understanding. Chapter 2 summarizes the synthetic works from the literatures
    and reveals the synthetic urgency of these molecules.
    Chapter 3 is dedicated to the synthesis of di- and triacylated phosphatidylinositol
    mannosides. First part of this chapter explains our concerns with PIM studies, the specific
    aims as well as the retro-synthetic plan. The following section demonstrates the
    desymmetrization of myo-inositol using D-mannosyl donor as a chiral auxillary and its
    application to the synthesis of di- and triacylated PIM2.
    Chapter 4 outlines the synthesis of tetraacylated phosphatidylinositol
    hexamannoside, beginning with the discussion about the aims and retrosynthesis. The
    preparation of myo-inositol building blocks, including the regioselective 2-O-arylation of
    myo-inositol-1,3,5-orthoformate is discussed in the following section. Next section of this
    chapter explores the preparation of mannosyl building blocks. A regioselective one-pot
    protection method was developed and applied for the preparation of 2-O and 6-O
    differentiated mannoses. The desymmetrization of myo-inositol using 6-O differentiated
    mannosyl donors and its exploitation for the synthesis of crucial pseudotrisaccharide
    intermediate of PIM6 is also conversed. Our struggle for the construction of the
    tetramannoside back bone and the synthesis of tuberculostearic acid is also narrated.
    Chapter 5 concludes our synthetic work described in Chapters 3 and 4. Chapter 6
    provides the experimental details of our synthetic work for this dissertation.


    Abstract..........................................................................................................................i Aknowledgement.........................................................................................................iii Abbreviations...............................................................................................................iv Content........................................................................................................................vii List of Figures………………………………………………………………………...x List of Tables……………………………………………………………………..…xii List of Equations……………………………………………………………………xiii List of Schemes……………………………………………………………………..xvi Chapter 1. General Introduction to the Tuberculosis, Mycobacterial Cell Wall and the Biology of Phosphatidylinositol Mannosides...................................1 1.1 Tuberculosis…………………………………………………………………1 1.1.1 Pathology of tuberculosis............................................................................ 1 1.1.2 Current drugs and drug resistance of TB.....................................................4 1.1.3 TB vaccines……..…………………..…………………………………….5 1.2. Structure and function of mycobacterial cell envelope………………….…6 1.2.1. General features of the mycobacterial cell envelope…………..…………8 1.2.2 Phosphatidylinositol mannoside (PIM), lipomannan (LM) and lipoarabinomannan (LAM)………………………………………………...11 1.2.3 Biosynthesis of PIM……..……………………………………………….14 1.2.4 Biological roles of PIMs, LM and LAM………..………………………..18 1.2.5 PIMs as vaccine candidates………..……………………………………..20 Chapter 2. Literature Reports for the Synthesis of Phosphatidylinositol Mannosides (PIMs) and Preparation of Chiral myo-Inositol Derivatives……………….22 2.1. Synthesis of PIMs, LM and their analogues……………...………………..22 Synthesis of Manninositose by Angyal and Shelton……..………………...22 Synthesis of Mannoinositose by Klyashchitskii and coworkers……..…….23 Synthesis of PIM2 by van Boom and group……………………………..…23 Synthesis of PIM4-glycan by Mereyala and Gaddam…..………………….24 Synthesis of PIM2 by Watanabe……………………………………...…….25 Synthesis of PIM1 by Schmidt’s group………………………………….....27 Fraser-Reid’s synthesis of LAM like lipophosphoglycan applying n- pentyl glycoside methodology………………………………………….….28 Seeberger’s Synthesis of AcPIM2 and AcPIM6……………………….……30 Synthesis of PIMs and their ether-analogues by Larsen and Painter………34 Synthesis of PIM2 by Lear and group……………………………………...35 2.2. myo-Inositol………………………………………………………………..36 2.2.1 Introduction……………………………………………………………….37 2.2.2. Preparation of chiral myo-inositol derivatives…………………………...37 Synthesis of myo-inositol building blocks from natural derivatives……….38 Enzymatic resolution of myo-inositol……………………………………...38 Chemical synthesis of enantiopure myo-inositol derivatives using chiral auxiliaries…………………………………………………………………...40 Preparation of enantiopure myo-inositol from the chiral starting material....42 Chapter 3. Synthesis of Diacyl-phosphatidylinositol Dimannoside (Ac2PIM2) and Triacyl-phosphatidylinositol Dimannoside (Ac3PIM2)……………………46 3.1 Specific aims and retro-synthetic plans……………………………………46 3.2 Specific aims……………………………………………………………….46 3.3 Retrosynthetic plans………………………………………………………..47 3.4 Synthesis of myo-inositol building blocks…………………………………49 3.5 Preparation of D-mannose-derived donors 125, 127-129………………….50 3.6 Desymmetrization of myo-inositol 119 for PIM2………………………….52 3.7 Structural determination of diastereomers 130-133………………………..55 3.8 Construction of Core unit of PIM2 117…………………………………….58 3.9 Desymmetrization of myo-inositol triol 79………………………………...59 3.10 A plausible mechanism for the desymmetrization of myo-inositol……….61 3.11 Regioselective protection of tetraol 116 and synthesis of intermediate 148……………………………………………………………..…………..63 3.12 Synthesis of the H-phosphonate. 3.11 Synthesis of diacylated PIM2 111…………………………………………69 3.12 Synthesis of triacylated PIM2 112………………………………………...70 Chapter 4. Synthesis of Tetraacylated Phosphatidylinositol Hexamannoside………73 4.1 Specific aims and retrosynthesis of tetraacylated PIM6…………………….73 4.2 Preparation of myo-inositol building blocks………………………………..75 4.3 Preparation of D-mannose-derived building blocks………………………...81 4.4 Preparation of 2-O-mannosylated derivative 201…………………………..89 4.5 Desymmetrization of myo-inositol diol 119 for PIM6….……………………90 4.6 Structure determination of diastereomers 206 and 207…………………….94 4.7 Preparation of pseudotrisaccharide 214…………………………………….95 4.8 Preparation of psuedotrisaccharide 218…………………………………….96 4.9 Regioselective benzylation of tetraol 218…………………………………..97 4.10. Preparation of Psuedotrisaccharide intermediate 224…………………...100 4.11 Preparation of compound 225……………………………………………103 4.12 Desymmetrization of myo-inostiol-disaccharide 225……………………104 4.13 Preparation of 1,6-linked dimannosyl acceptor 231……………………..106 4.14 Preparation of 1,2-linked dimannosyl donors 236, 237 and 238………...109 4.15 Construction of PIM6 skeleton from reducing end to non-reducing end...113 4.16 Assembley of PIM6 from non-reducing end to reducing end…………….114 4.17. Preparation of tetramannoside 242………………………………………115 4.18 Assembly of PIM6 skeleton 251………………………………………….123 4.19 Regioselective stearoylation……………………………………………..125 4.20 Tuberculostearic acid……………………………….……………………126 4.21 Preparation of H-phosphonate 157………………………………………127 4.22 Synthesis of Ac4PIM6 155……………………………………………….128 Chapter 5. Conclusion……………………………………………………………..130 Chapter 6. Experimental section…………………………………………………..136 References…………………………………………………………………………242 Spectra………………………………………………………………………….….255

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