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研究生: 陳珈丰
Chen, Jia-Fong.
論文名稱: 中華眼鏡蛇毒L型胺基酸氧化酶受質專一性探討
The amino acid substrate specificity of L-amino acid oxidase (LAAO) from Taiwan cobra (Naja atra)
指導教授: 吳文桂
Wu, Wen-Guey
口試委員: 簡昆鎰
Chien, Kun-Yi
李紹禎
Lee, Shao-Chen
學位類別: 碩士
Master
系所名稱: 生命科學暨醫學院 - 生物資訊與結構生物研究所
Institute of Bioinformatics and Structural Biology
論文出版年: 2019
畢業學年度: 107
語文別: 中文
論文頁數: 84
中文關鍵詞: L型胺基酸氧化酶中華眼鏡蛇L型胺基酸氧化酶
外文關鍵詞: L-amino acid oxidase, LAAO, Naja atra L-amino acid oxidase, NA-LAAO, Taiwan cobra ( Naja atra)
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  • 本篇論文主要探討粗蛇毒的L型胺基酸氧化酶相對活性測試與中華眼鏡蛇L型胺基酸氧化酶(NA-LAAO)的受質專一性。在粗蛇毒中,龜殼花的LAAO含量較蝙蝠蛇科的LAAO多,但活性卻沒有較強,而在受質為Ile時,龜殼花LAAO相對活性較蝙蝠蛇科的LAAO高。利用 FPLC將中華眼鏡蛇粗蛇毒使用不同的管柱分離純化出NA-LAAO,由米氏曲線得到NA-LAAO在11種胺基酸下的Km、Vmax、kcat及受質專一性,NA-LAAO與其他蛇毒LAAO相同,在疏水性胺基酸有較高的受質專一性,於binding pocket中,NA-LAAO胺基酸序列第242號胺基酸與紅口蝮LAAO(CR-LAAO)及山蝰LAAO(DR-LAAO)不同,DR-LAAO及CR-LAAO在該位置胺基酸為His,NA-LAAO為Ser,在Arg受質專一性結果NA-LAAO為DR-LAAO的兩倍,中華眼鏡蛇與孟加拉眼鏡蛇於演化及地理位置上較相近,但於中華眼鏡蛇L型胺基酸氧化酶(NA-LAAO)與孟加拉眼鏡蛇L型胺基酸氧化酶(NK-LAAO)的受質專一性結果卻不盡相同,因此利用蛋白質結構、胺基酸序列比對與受質專一性去探討NA-LAAO與NK-LAAO的差異,並且提出中華眼鏡蛇L型胺基酸氧化酶會影響mTORC1及IDO-1進而使人體免疫系統受到抑制的假說。


    SV-LAAO, also known as snake venom L-amino acid oxidase, is a high molecular weight flavoenzyme which catalyzes L-amino acids and produce α-keto acids, ammonia and H2O2. In this study, we study the relative activity of snake venom L-amino acid oxidase (SV-LAAO) from various snake venom and the substrate specificity of Naja atra L-amino acid oxidase (NA-LAAO). Although Trimeresurus mucrosquamatus venom contains more LAAO than elapidae venom: Naja atra (NA), Naja kaouthia (NK), Naja nivea (NN), the activity of TM-LAAO is lower than NA-LAAO, NK-LAAO, NN-LAAO. We purified NA-LAAO and utilized the Michealis-Menten curve to calculate Km, Vmax, kcat and substrate specificity with 11 kinds of amino acids. Compared with other SV-LAAO, NA-LAAO has stronger activity toward hydrophobic amino acids, such as Leu, Phe and Met. The binding pocket of NA-LAAO is different from Calloselasma rhodostoma LAAO (CR-LAAO) and Daboia russelii LAAO (DR-LAAO) by residue 242. DR-LAAO and CR-LAAO has His but NA-LAAO has Ser at residue 242. In addition, NA-LAAO has stronger activity toward Arg than DR-LAAO and CR-LAAO. Naja atra is closely related to Naja kaouthia in phylogenetic and geographic location so we compare the substrate specificity and 3D-structure of NA-LAAO with Naja kaouthia L-amino acid oxidase (NK-LAAO). According to the sequence alignment and structural comparison, NA-LAAO is different from NK-LAAO by 12 residues in sequence and the Y-shape channel of NA-LAAO adopts more hydrophobicity than NK-LAAO. Given that Leu and Arg are the upstream signals of mTORC1 and mTORC1 which can affect T-cell proliferation and activation, IDO-1(Indoleamine 2,3-dioxygenase 1) can also catalyzis Trp and its product can make vasodilation. Consequently, our group proposed that NA-LAAO catalyzes Leu, Arg, Trp to affect mTORC1 and together with IDO-1 inhibit the human immune system and influence the blood pressure.

    Abstract I 中文摘要 II 英文縮寫 III 中英文對照表 V 圖目錄 VII 表目錄 X 目錄 1 第一章 緒論 4 1-1毒素、毒物及毒液 4 1-2毒蛇及蛇毒 6 1-3中華眼鏡蛇及蛇毒 12 1-5 L型胺基酸氧化酶 17 1-5-1 L型胺基酸氧化酶 17 1-5-2胺基酸氧化酶生化、結構與活性 17 1-5-3 L型胺基酸氧化酶生理及藥理 18 1-5-4中華眼鏡蛇蛇毒蛋白—L型胺基酸氧化酶 18 1-5-5 醣基化的蛇毒蛋白 19 1-6酵素動力論 24 1-7胺基酸生理功能 25 研究目的 27 第二章 材料與方法 28 2-1 實驗材料與儀器 28 2-2 高分子量蛇毒蛋白之純化、製備與定量 28 2-3 中華眼鏡蛇胺基酸氧化酶純化及製備 29 2-4 胺基酸氧化酶相對活性測定 31 2-5 中華眼鏡蛇胺基酸氧化酶受質專一性與酵素動力活性測定 32 第三章 結果 34 3-1高分子量蛇毒蛋白之純化、製備與定量結果 34 3-2胺基酸氧化酶相對活性測定結果 35 3-3 NA-LAAO於相對活性測定結果 36 3-4 NA_LAAO 米氏曲線及受質專一性結果 39 3-4-1 H2O2 標準曲線及Leu reaction rate 39 3-4- 2 NA-LAAO溫度影響 40 3-4-3米氏曲線及受質專一性結果 42 第四章 討論與結論 46 參考文獻 59 附錄 i 附錄一、高分子量蛇毒蛋白純化(附錄圖一) i 附錄二、中華眼鏡蛇胺基酸氧化酶純化結果(附錄圖二) i 附錄三、小鼠測試CTX-A3濃度、高分子量蛇毒蛋白及反應時間下的潰爛結果 vi 3-1、材料與方法 vi 3-2、結果: vii 附錄四、小鼠CTX-A3與高分子量蛇毒蛋白和抑制劑的作用 viii 附錄五、抗蛇毒血清 xi 5-1、實驗材料方法與原理: xi 5-2、結果 xi 附錄六、11種胺基酸Km、Vmax、kcat、substrate specificity xiii

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