研究生: |
卓慶昌 Cho, Ching Chang |
---|---|
論文名稱: |
探討人類鈣離子結合S100A4 與EGF及Amlexanox之間的交互作用 Interaction of human calcium-bound S100A4 with EGF and Amlexanox |
指導教授: |
余靖
Yu, Chin |
口試委員: |
陳金榜
Chen, Chinpan 莊偉哲 Chuang, Woei Jer 洪嘉呈 Homg, Jia Cherng 江昀緯 Chiang, Yun Wei |
學位類別: |
博士 Doctor |
系所名稱: |
理學院 - 化學系 Department of Chemistry |
論文出版年: | 2015 |
畢業學年度: | 103 |
語文別: | 中文 |
論文頁數: | 110 |
中文關鍵詞: | 核磁共振 、蛋白質結構 、表皮生長因子 、氨來占諾 、S100蛋白 |
外文關鍵詞: | NMR, Protein structure, EGF, Amlexanox, S100 protein |
相關次數: | 點閱:4 下載:0 |
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人類S100蛋白質家族是由一群小分子的酸性蛋白所組成,這個蛋白質家族在結構上具有高度相似性,它們皆具有兩個EF-hand motif能與鈣離子結合,在與鈣離子結合後會改變其構形並與目標蛋白產生交互作用,進而引發一連串的生化反應,S100A4為S100蛋白質家族其中一員且EGF蛋白是能與S100A4結合的標的蛋白之一。人類表皮生長因子(Human Epidermal Growth Factor, hEGF)可促使多種生物細胞(包括腫瘤細胞)的增生分化,而此生物活性是透過EGF蛋白與細胞膜表面上的特定受體(EGFR)結合進而誘導產生一系列訊息傳導所致。在先前的研究中,作者利用西方點墨法指出S100A4蛋白會與EGF蛋白產生交互作用。氨來呫諾(Amlexanox, AMX)是一種特殊的抗發炎及抗過敏的藥物,目前主要是用來治療口腔潰瘍,在本實驗中我們以HSQC滴定證實AMX與S100A4之間有交互作用。我們利用了螢光光譜儀(fluorescence spectroscopy)及核磁共振光譜儀(NMR spectroscopy)證明了AMX與EGF兩者分別與S100A4之間的交互作用關係,再加上我們解出的複合體水溶液結構,接著以WST-1 assay研究三者之間在生物活性方面的調控,綜合以上研究成果希望能進一步的探討S100A4、EGF與AMX三者在生物活性調控機轉之間的關係。
Human S100 proteins belong to a family of small, acidic protein which shares high structure similarities with each other: they all have two EF-hand motifs and could bind calcium. When S100A4 binds with calcium, it will change its conformation and interact with their target protein. Human epidermal growth factor ( hEGF ) is the target protein which is also one of the high affinity ligands of EGFR. EGF/EGFR system promotes cell survival, growth and differentiation via the activation of several integrated signaling pathways. In recent studies, scientists used western blotting to show that S100A4 could interact with EGF. Amlexanox is an anti-inflammatory and antiallergic drug used to treat recurrent aphthous ulcers. In this study, we found AMX interact with S100A4 using HSQC titrations. We elucidated the interactions of S100A4 with EGF and AMX using fluorescence spectroscopy and NMR spectroscopy. We solved the solution complex structures and investigated the bioactivities using WST-1 assay. The results we reported could help to investigate the biological mechanism among S100A4, EGF and AMX.
Bhattacharya S, Bunick CG, Chazin WJ (2004) Target selectivity in EF-hand calcium binding proteins. Biochimica et biophysica acta (1742):69-79
Bielicky T (1963) LIGHT-SENSITIVE PSORIASIS AND ANTIMALARIAL DRUGS. The Journal of investigative dermatology (41):1-2
Bienz M, Clevers H (2000) Linking colorectal cancer to Wnt signaling. Cell (103):311-320
Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW, Jiang JS, Kuszewski J, Nilges M, Pannu NS, Read RJ, Rice LM, Simonson T, Warren GL (1998) Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta crystallographica Section D, Biological crystallography (54):905-921
Camby I, Lefranc F, Titeca G, Neuci S, Fastrez M, Dedecken L, Schafer BW, Brotchi J, Heizmann CW, Pochet R, Salmon I, Kiss R, Decaestecker C (2000) Differential expression of S100 calcium-binding proteins characterizes distinct clinical entities in both WHO grade II and III astrocytic tumours. Neuropathology and applied neurobiology (26):76-90
Carreira MJ, Cabello D, Penedo MG, Mosquera A (1998) Computer-aided diagnoses: automatic detection of lung nodules. Medical physics (25):1998-2006
Chan WY, Xia CL, Dong DC, Heizmann CW, Yew DT (2003) Differential expression of S100 proteins in the developing human hippocampus and temporal cortex. Microscopy research and technique (60):600-613
Cho YG, Nam SW, Kim TY, Kim YS, Kim CJ, Park JY, Lee JH, Kim HS, Lee JW, Park CH, Song YH, Lee SH, Yoo NJ, Lee JY, Park WS (2003) Overexpression of S100A4 is closely related to the aggressiveness of gastric cancer. APMIS : acta pathologica, microbiologica, et immunologica Scandinavica (111):539-545
Cohen S (1962) Isolation of a mouse submaxillary gland protein accelerating incisor eruption and eyelid opening in the new-born animal. The Journal of biological chemistry (237):1555-1562
Cohen S, Carpenter G (1975) Human epidermal growth factor: isolation and chemical and biological properties. Proceedings of the National Academy of Sciences of the United States of America (72):1317-1321
Davies BR, O'Donnell M, Durkan GC, Rudland PS, Barraclough R, Neal DE, Mellon JK (2002) Expression of S100A4 protein is associated with metastasis and reduced survival in human bladder cancer. The Journal of pathology (196):292-299
Donato R, Heizmann CW (2010) S100B Protein in the Nervous System and Cardiovascular Apparatus in Normal and Pathological Conditions. Cardiovascular psychiatry and neurology (2010):929712
Duelli A, Kiss B, Lundholm I, Bodor A, Petoukhov MV, Svergun DI, Nyitray L, Katona G (2014) The C-terminal random coil region tunes the Ca(2)(+)-binding affinity of S100A4 through conformational activation. PloS one (9):e97654
Fearon ER, Vogelstein B (1990) A genetic model for colorectal tumorigenesis. Cell (61):759-767
Fujiuchi S, Ohsaki Y, Kikuchi K (1997) Suramin inhibits the growth of non-small-cell lung cancer cells that express the epidermal growth factor receptor. Oncology (54):134-140
Garrett SC, Varney KM, Weber DJ, Bresnick AR (2006) S100A4, a mediator of metastasis. The Journal of biological chemistry (281):677-680
Gongoll S, Peters G, Mengel M, Piso P, Klempnauer J, Kreipe H, von Wasielewski R (2002) Prognostic significance of calcium-binding protein S100A4 in colorectal cancer. Gastroenterology (123):1478-1484
Grigorian M, Andresen S, Tulchinsky E, Kriajevska M, Carlberg C, Kruse C, Cohn M, Ambartsumian N, Christensen A, Selivanova G, Lukanidin E (2001) Tumor suppressor p53 protein is a new target for the metastasis-associated Mts1/S100A4 protein: functional consequences of their interaction. The Journal of biological chemistry (276):22699-22708
Hansen LH, Knudsen S, Sorensen SJ (1998) The effect of the lacY gene on the induction of IPTG inducible promoters, studied in Escherichia coli and Pseudomonas fluorescens. Current microbiology (36):341-347
Hernan R, Fasheh R, Calabrese C, Frank AJ, Maclean KH, Allard D, Barraclough R, Gilbertson RJ (2003) ERBB2 up-regulates S100A4 and several other prometastatic genes in medulloblastoma. Cancer research (63):140-148
Huang HW, Mohan SK, Yu C (2010) The NMR solution structure of human epidermal growth factor (hEGF) at physiological pH and its interactions with suramin. Biochemical and biophysical research communications (402):705-710
Ikura M, Ames JB (2006) Genetic polymorphism and protein conformational plasticity in the calmodulin superfamily: two ways to promote multifunctionality. Proceedings of the National Academy of Sciences of the United States of America (103):1159-1164
Ismail NI, Kaur G, Hashim H, Hassan MS (2008) S100A4 overexpression proves to be independent marker for breast cancer progression. Cancer cell international (8):12
Jacob F, Monod J (1961) Genetic regulatory mechanisms in the synthesis of proteins. Journal of molecular biology (3):318-356
Jura N, Endres NF, Engel K, Deindl S, Das R, Lamers MH, Wemmer DE, Zhang X, Kuriyan J (2009) Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment. Cell (137):1293-1307
Kiryushko D, Novitskaya V, Soroka V, Klingelhofer J, Lukanidin E, Berezin V, Bock E (2006) Molecular mechanisms of Ca(2+) signaling in neurons induced by the S100A4 protein. Molecular and cellular biology (26):3625-3638
Klingelhofer J, Moller HD, Sumer EU, Berg CH, Poulsen M, Kiryushko D, Soroka V, Ambartsumian N, Grigorian M, Lukanidin EM (2009) Epidermal growth factor receptor ligands as new extracellular targets for the metastasis-promoting S100A4 protein. The FEBS journal (276):5936-5948
Kozlova EN, Lukanidin E (1999) Metastasis-associated mts1 (S100A4) protein is selectively expressed in white matter astrocytes and is up-regulated after peripheral nerve or dorsal root injury. Glia (27):249-258
Kriajevska M, Fischer-Larsen M, Moertz E, Vorm O, Tulchinsky E, Grigorian M, Ambartsumian N, Lukanidin E (2002) Liprin beta 1, a member of the family of LAR transmembrane tyrosine phosphatase-interacting proteins, is a new target for the metastasis-associated protein S100A4 (Mts1). The Journal of biological chemistry (277):5229-5235
Landriscina M, Prudovsky I, Mouta Carreira C, Soldi R, Tarantini F, Maciag T (2000) Amlexanox reversibly inhibits cell migration and proliferation and induces the Src-dependent disassembly of actin stress fibers in vitro. The Journal of biological chemistry (275):32753-32762
Laskowski RA, Rullmannn JA, MacArthur MW, Kaptein R, Thornton JM (1996) AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR. Journal of biomolecular NMR (8):477-486
Leclerc E, Fritz G, Vetter SW, Heizmann CW (2009) Binding of S100 proteins to RAGE: an update. Biochimica et biophysica acta (1793):993-1007
Lemmon MA, Bu Z, Ladbury JE, Zhou M, Pinchasi D, Lax I, Engelman DM, Schlessinger J (1997) Two EGF molecules contribute additively to stabilization of the EGFR dimer. The EMBO journal (16):281-294
Linge JP, Nilges M (1999) Influence of non-bonded parameters on the quality of NMR structures: a new force field for NMR structure calculation. Journal of Biomolecular NMR (13):51-59
Lu HS, Chai JJ, Li M, Huang BR, He CH, Bi RC (2001) Crystal structure of human epidermal growth factor and its dimerization. The Journal of biological chemistry (276):34913-34917
Malashkevich VN, Varney KM, Garrett SC, Wilder PT, Knight D, Charpentier TH, Ramagopal UA, Almo SC, Weber DJ, Bresnick AR (2008) Structure of Ca2+-bound S100A4 and its interaction with peptides derived from nonmuscle myosin-IIA. Biochemistry (47):5111-5126
Marenholz I, Heizmann CW, Fritz G (2004) S100 proteins in mouse and man: from evolution to function and pathology (including an update of the nomenclature). Biochemical and biophysical research communications (322):1111-1122
Marenholz I, Lovering RC, Heizmann CW (2006) An update of the S100 nomenclature. Biochimica et biophysica acta (1763):1282-1283
Massague J, Pandiella A (1993) Membrane-anchored growth factors. Annual review of biochemistry (62):515-541
Miller GA, Feldman JD (1977) Effect of macrophages and antibodies on in vivo growth of Moloney sarcoma in the rat. Journal of immunology (Baltimore, Md : 1950) (119):1445-1451
Montelione GT, Wuthrich K, Burgess AW, Nice EC, Wagner G, Gibson KD, Scheraga HA (1992) Solution structure of murine epidermal growth factor determined by NMR spectroscopy and refined by energy minimization with restraints. Biochemistry (31):236-249
Moroz OV, Dodson GG, Wilson KS, Lukanidin E, Bronstein IB (2003) Multiple structural states of S100A12: A key to its functional diversity. Microscopy research and technique (60):581-592
Ogiso H, Ishitani R, Nureki O, Fukai S, Yamanaka M, Kim JH, Saito K, Sakamoto A, Inoue M, Shirouzu M, Yokoyama S (2002) Crystal structure of the complex of human epidermal growth factor and receptor extracellular domains. Cell (110):775-787
Ostendorp T, Leclerc E, Galichet A, Koch M, Demling N, Weigle B, Heizmann CW, Kroneck PM, Fritz G (2007) Structural and functional insights into RAGE activation by multimeric S100B. The EMBO journal (26):3868-3878
Polakis P (2007) The many ways of Wnt in cancer. Current opinion in genetics & development (17):45-51
Rieping W, Habeck M, Bardiaux B, Bernard A, Malliavin TE, Nilges M (2007) ARIA2: automated NOE assignment and data integration in NMR structure calculation. Bioinformatics (Oxford, England) (23):381-382
Rosty C, Ueki T, Argani P, Jansen M, Yeo CJ, Cameron JL, Hruban RH, Goggins M (2002) Overexpression of S100A4 in pancreatic ductal adenocarcinomas is associated with poor differentiation and DNA hypomethylation. The American journal of pathology (160):45-50
Rudland PS, Platt-Higgins A, Renshaw C, West CR, Winstanley JH, Robertson L, Barraclough R (2000) Prognostic significance of the metastasis-inducing protein S100A4 (p9Ka) in human breast cancer. Cancer research (60):1595-1603
Rustandi RR, Baldisseri DM, Weber DJ (2000) Structure of the negative regulatory domain of p53 bound to S100B(betabeta). Nature structural biology (7):570-574
Shen Y, Delaglio F, Cornilescu G, Bax A (2009) TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts. Journal of biomolecular NMR (44):213-223
Shishibori T, Oyama Y, Matsushita O, Yamashita K, Furuichi H, Okabe A, Maeta H, Hata Y, Kobayashi R (1999) Three distinct anti-allergic drugs, amlexanox, cromolyn and tranilast, bind to S100A12 and S100A13 of the S100 protein family. The Biochemical journal (338 ( Pt 3)):583-589
Smith SP, Shaw GS (1998) A change-in-hand mechanism for S100 signalling. Biochemistry and cell biology = Biochimie et biologie cellulaire (76):324-333
Sparvero LJ, Asafu-Adjei D, Kang R, Tang D, Amin N, Im J, Rutledge R, Lin B, Amoscato AA, Zeh HJ, Lotze MT (2009) RAGE (Receptor for Advanced Glycation Endproducts), RAGE ligands, and their role in cancer and inflammation. Journal of translational medicine (7):17
Srikrishna G (2012) S100A8 and S100A9: new insights into their roles in malignancy. Journal of innate immunity (4):31-40
Takenaga K, Nakamura Y, Sakiyama S, Hasegawa Y, Sato K, Endo H (1994) Binding of pEL98 protein, an S100-related calcium-binding protein, to nonmuscle tropomyosin. The Journal of cell biology (124):757-768
Teratani T, Watanabe T, Yamahara K, Kumagai H, Ishikawa A, Arai K, Nozawa R (2002) Restricted expression of calcium-binding protein S100A5 in human kidney. Biochemical and biophysical research communications (291):623-627
Ullrich A, Coussens L, Hayflick JS, Dull TJ, Gray A, Tam AW, Lee J, Yarden Y, Libermann TA, Schlessinger J, et al. (1984) Human epidermal growth factor receptor cDNA sequence and aberrant expression of the amplified gene in A431 epidermoid carcinoma cells. Nature (309):418-425
Vallely KM, Rustandi RR, Ellis KC, Varlamova O, Bresnick AR, Weber DJ (2002) Solution structure of human Mts1 (S100A4) as determined by NMR spectroscopy. Biochemistry (41):12670-12680
Venturi S, Venturi M (2009) Iodine in evolution of salivary glands and in oral health. Nutrition and health (20):119-134
Ward CW, Hoyne PA, Flegg RH (1995) Insulin and epidermal growth factor receptors contain the cysteine repeat motif found in the tumor necrosis factor receptor. Proteins (22):141-153
Wishart DS, Sykes BD (1994) The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data. Journal of biomolecular NMR (4):171-180
Wright NT, Cannon BR, Wilder PT, Morgan MT, Varney KM, Zimmer DB, Weber DJ (2009) Solution structure of S100A1 bound to the CapZ peptide (TRTK12). Journal of molecular biology (386):1265-1277
Yap KL, Ames JB, Swindells MB, Ikura M (1999) Diversity of conformational states and changes within the EF-hand protein superfamily. Proteins (37):499-507
Zimmer DB, Weber DJ (2010) The Calcium-Dependent Interaction of S100B with Its Protein Targets. Cardiovascular psychiatry and neurology (2010)