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研究生: 劉俞伶
Low, Ee Ling
論文名稱: 重組鱟血漿凝集素2之細菌及配體結合活性探討
Characterization of bacteria and ligand binding activities of recombinant Tachypleus plasma lectin 2
指導教授: 張大慈
Chang, Margaret Dah-Tsyr
口試委員:
學位類別: 碩士
Master
系所名稱: 生命科學暨醫學院 - 分子與細胞生物研究所
Institute of Molecular and Cellular Biology
論文出版年: 2010
畢業學年度: 98
語文別: 英文
論文頁數: 79
中文關鍵詞: 米根黴菌澱粉吸附區域鱟血漿凝集素 2脂多醣
外文關鍵詞: Rhizopus oryzae starch binding domain, Tachypleus plasma lectin 2, lipopolysaccharide
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  • 由台灣種鱟 (Taiwanese Tachypleus tridentatus) 的血漿中分離出之血漿凝集素 2 (TPL-2) 具有辨識格蘭氏陽性及陰性菌的功能。以往利用嗜甲醇酵母菌 (Pichia pastoris) 表現TPL-2之表現量及產率皆低,因此,結合親和性融合蛋白標誌以提升 TPL-2 的表現量,並探討其生物功能為本論文主要目標。本研究利用蛋白質工程技術設計TPL-2分子,使之具備胺基端的米根黴菌澱粉吸附區域 (Rhizopus oryzae starch-binding domain, RoSBD)、米根黴菌葡萄糖水解酵素連接片段 (Rhizopus oryzae glucoamylase linker, RoLK)、以及羧基端的台灣種類鱟血漿凝集素 2 組成ALT2,繼而將其蛋白質序列中兩個N-醣基化位置修飾,使天門冬氨酸 (Asparagine, Asn) 140 及 150皆突變成天門冬氨酸鹽 (Asparatate, Asp)之ALT2-dm。運用此新穎的重組嗜甲醇酵母菌進行工業等級大量表現ALT2-dm,能以吸附澱粉的方式純化,且純化後之ALT2-dm產量可達到每公升79.8 毫克。其生物功能性分析顯示ALT2-dm 能識別特定的細菌並結合病原相關分子型態 (pathogen associated molecular patterns, PAMPs),例如格蘭氏陽性菌的脂胞壁酸 (lipoteichoic acid, LTA) 及格蘭氏陰性菌的脂多醣 (lipopolysaccharide, LPS) 。此外,亦發現 ALT2-dm 能辨識原核生物細胞壁中保留性單醣分子結構,繼而發展高靈敏性之檢測方法。本論文之具體貢獻為大量表現鱟血漿凝集素以進行功能分析、修飾蛋白質的醣基化官能基以探討蛋白質與醣配體結合個性、及發現重組鱟血漿凝集素之新穎功能。


    Tachypleus plasma lectin two (TPL-2) derived from the hemolymph of Taiwanese horseshoe crab, has been found to be able to recognize Gram-positive and negative bacteria. Previously, recombinant TPL-2 was expressed by yeast P. pastoris, but the expression level and purification yield were low. Therefore, the aim of this study is to increase TPL-2 expression by fusing an affinity tag for investigation of biological functions. Recombinant TPL-2 was designed and engineered to be consisted of an N-terminal Rhizopus oryzae starch binding domain (RoSBD), an R. oryzae glucoamylase linker (RoLK), and a C-terminal TPL-2 to give ALT2. ALT2 was further modified on two N-glycosylation sites at Asn 140 and 150 to make ALT2-dm. ALT2-dm was overexpressed in P. pastoris from laboratory scale up to 100 L, and starch matrix adsorption was proven to be feasible for the purification of and a purification yield of 79.8 mg/L was achieved. Functional analyses revealed that ALT2-dm recognized specific bacteria and the pathogen associated molecular patterns (PAMPs) such as lipoteichoic acid (LTA) in Gram-positive bacteria and lipopolysaccharide (LPS) in Gram-negative bacteria. In addition, ALT2-dm was capable of recognizing a conserved moiety in the prokaryotic cell wall which in turn led to the development of high sensitivity detection methods. The major contribution of this study include achievement of high level expression of TPL-2, modulation of protein glycosylation, characterization of protein-glycan interaction, and discovery of a novel function of recombinant TPL-2.

    中文摘要 I Abstract II Acknowledgement III Table of Contents IV List of Figures VI List of Tables VIII List of Appendix IX Abbreviations X Chapter 1 Introduction 1 Chapter 2 Materials and Methods 12 2.1 Microbial strains and plasmids 12 2.2 Culture media composition 13 2.3 Site-directed mutagenesis 13 2.4 Plasmid construction 14 2.5 Competent cell preparation and transformation 15 2.6 Mini-preparation of plasmid 15 2.7 Yeast transformation 16 2.8 Protein expression in P. pastoris 17 2.8.1 Small scale expression 17 2.8.2 Large scale expression 17 2.9 Determination of N-linked and O-linked glycosylation 18 2.10 Sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) 19 2.11 Western blot analysis 19 2.12 Purification by amylose column chromatography 20 2.13 Purification by corn starch-stirring method 21 2.14 Determination of protein concentration 21 2.14.1 Bicinchoninic acid (BCA) assay 21 2.14.2 Enzyme-linked immunosorbent assay (ELISA) 22 2.15 Enzyme-linked imunosorbent assay (ELISA) 22 2.16 Inhibition and competitive ELISA 23 2.17 Magnetic Reduction (MR) Assay 24 2.18 Analytical Ultracentrifugation 24 2.19 Mass spectrometry determination 25 2.20 Statistical analysis 25 2.21 Secondary structure prediction 25 Chapter 3 Results 26 3.1 Expression and secretion of different recombinant TPL-2 in P. pastoris GS115 26 3.2 Purification of ALT2-dm 28 3.2.1 Amylose column chromatography 28 3.2.2 Corn starch-stirring method 29 3.3 Bacteria-binding activity of ALT2-dm 30 3.4 Ligand specificity of ALT2-dm 31 3.5 Determination of ALT2-dm forms 34 3.6 Effects of N-glycosylation on bacteria binding activity 35 Chapter 4 Discussion 36 References 43 Figures 52 Tables 70 Appendix 72

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