簡易檢索 / 詳目顯示

研究生: 潘考祿
Pan, Kao-Lu
論文名稱: 發展適合C型肝炎病毒感染之細胞培養模式
Development of a Cell Culture Model for Hepatitis C Virus (HCV) Infection
指導教授: 宋信文
Sung, Hsing-Wen
徐祖安
Hsu, Tsu-An
口試委員:
學位類別: 博士
Doctor
系所名稱: 工學院 - 化學工程學系
Department of Chemical Engineering
論文出版年: 2010
畢業學年度: 98
語文別: 中文
論文頁數: 126
中文關鍵詞: C型肝炎病毒白蛋白甲胎蛋白性鹼性磷酸酶白蛋報導系統
外文關鍵詞: Hepatitis C Virus, albumin, α-fetoprotein, secreted alkaline phosphatase, reporter system
相關次數: 點閱:3下載:0
分享至:
查詢本校圖書館目錄 查詢臺灣博碩士論文知識加值系統 勘誤回報
  • 目前最先進的C型肝炎病毒體外培養系統就屬HCV-JFH1病毒株或是JFH1嵌合體的病毒株感染肝癌細胞株Huh7。對於JFH1以外的病毒株包括一般病人血清的HCV,都較難在Huh7細胞中複製與增殖。因此發展適合所有基因型HCV感染的細胞培養系統是非常重要的。一般最適合提供HCV感染的宿主細胞還是以具有高度分化的人類初代肝細胞 (human primary hepatocyte) 最佳,但是此類細胞的培養與功能的維持相當困難。因此本研究試圖利用幹細胞分化技術,分化間質幹細胞成為具有高度分化程度的肝臟細胞,以期能替代人類初代肝細胞成為HCV的宿主細胞。為此我們設計以白蛋白 (albumin;ALB) 與甲胎蛋白 (α-fetoprotein;AFP) 之調控元件為基礎,驅動表現分泌性鹼性磷酸酶白蛋 (secreted alkaline phosphatase;SEAP),發展高效率細胞模式篩選平台可以篩檢具有肝分化潛能之小分子化合物,分別有Huh7-ePALB-SEAP和Huh7-ePAFP-SEAP兩株細胞。透過新穎小分子化合物的添加,誘導間質幹細胞走向高分化程度的肝臟細胞。分析系統的統計學參數Z' factor其值都大於0.5,表示適合進行高效率篩選程序。接著,我們進行小規模的化合物 (2000個化合物) 篩選。我們發現harmine和許多類固醇分別可以誘導ALB和AFP調控元件增加SEAP活性,可是卻不能有效地改進間質幹細胞的肝分化程度以及對HCV-JFH1的感受性。雖然尚未發現可以具肝分化潛能之小分子化合物,但此系統提供作為一個高效率的篩選平台,因此也不排除再篩選大量化合物庫的可能性。

    另外,我們也設計一套可以有效監測JFH1病毒於細胞內活動的報導系統 (reporter system),透過化合物篩選方式搜尋影響病毒生命週期的小分子化合物,例如抑制病毒活動和活化病毒生命週期的化合物。報導系統的設計概念是以HCV NS3/4A蛋白酶的作用機制為基礎,建構綠螢光蛋白 (enhanced green fluorescent protein;EGFP) 基因連接NS4B/NS5A序列與SEAP基因的報導基因,EG(△4B5A)SEAP,並轉染於Huh7.5細胞株產生Huh7.5-EG(△4B5A)SEAP。NS4B/NS5A連接胜肽是NS3/4A蛋白酶切割的位置,經過JFH1感染後可以使SEAP分泌到細胞外並方便被我們偵測。我們最佳化了此系統的分析條件,發現JFH1病毒於感染後第六天有較顯著性的SEAP活性產生,同時也利用已知的抗病毒藥物,分別對於病毒的進入 (entry)、複製 (replication) 和分泌 (secretion) 進行測試,都呈現出很好的抑制效果。系統的統計學參數Z' factor亦大於0.5,可作為高效率篩選的平台。對於發展抗病毒藥物以及應用於改進HCV細胞培養的條件,提供了一個穩健的分析方法。本研究亦利用此分析方法,小量分析39個類固醇化合物,發現triamcinolone acetonide (TA) 可以有效的增加細胞中HCV的NS3蛋白酶表現量和病毒基因組的複製量。TA或許可以提供作為改進HCV細胞培養的小分子化合物之ㄧ。


    To date, the most advanced system for studying HCV infection and replication is to employ the JFH1 clone and/or its derivative JFH1-chimera combined with HCV-permissive cell lines, such as Huh7 or Huh7.5 cell lines. However, Huh7 or Huh7-derived cells were known to be non-ideal hosts to permit propagation of HCV virion obtained from HCV-positive patients. Therefore, it is important to develop cell culture systems for the infection/propagation of various HCV genotypes. In general, human primary hepatocytes are the most suitable host cells for HCV infection but they are difficult to be acquired from human bodies and also difficult to be maintained in cell culture. In this study, we attempted to obtain highly differentiated human hepatocytes derived from human mesenchymal stem cells (MSCs). The ultimate goal of this project is to provide a platform technology so that human primary hepatocytes can be substituted by MSCs-derived hepatocytes for studying HCV in cell culture. In order to reach this goal, we first attempted to create two cell-based reporter systems based on gene expression of albumin and α-fetoprotein to screen for compounds with potentials to enhance hepatic differentiation. We constructed two novel reporter genes, i.e., ePALB-SEAP and ePAFP-SEAP, wherein the expression of the secreted alkaline phosphatase (SEAP) is under the control of the regulator element of albumin (ALB) and a-fetoprotein (AFP) gene respectively. These two reporter genes were transfected into Huh7 cells and such cells, i.e., Huh7-ePALB-SEAP and Huh7-ePAFP-SEAP, were then employed to screen compounds with the capability of up-regulating the ALB or AFP regulator elements using SEAP as the reporter enzyme. The Z' factors in these screening systems were > 0.5 indicating that both systems are suitable for high-throughput screening of prospective ALB- or AFP-inducible compounds. Few compounds were found to be able to enhance the SEAP activity. However, these few compounds were identified to be false positives because they could not increase the levels of albumin or fetoprotein expression in human MSCs-derived hepatocytes. Therefore, we attempted to create an alternative reporter system for directly monitoring HCV infection/replication. The new reporter cell line, Huh7.5-EG(△4B5A)SEAP, was created. The reporter gene, EG(△4B5A)SEAP, encodes a viral protease-cleavable fusion protein in which the enhanced green fluorescence protein (EGFP) is linked to SEAP in frame via △4B5A, a peptide cleavage substrate for NS3/4A viral protease. Our studies demonstrate that virus replication/infection in Huh7.5-EG(△4B5A)SEAP cells can be indirectly quantified by measuring the SEAP activity in cell culture medium. The Huh7.5-EG(△4B5A)SEAP cells were also shown to be a suitable reporter cell line for understanding the intercellular activity of HCV by using known compounds targeting multiple stages of HCV life cycle. This system can be a robust assay for discovering key factors, such as compounds, cytokines, and microenvironment, to improve HCV-permissiveness of hepatocytes. This system was employed to analyze a small compound library contsisting of 39 steroid compounds. The results show that the amount of intercellular NS3 protease and HCV RNA can be effieiently enhanced by the administration of triamcinolone acetonide (TA) in hepatoma cell line. We suggest that TA could be a key factor to improve HCV-permissiveness of hepatocytes.

    目錄 第一章 序論 1 1.1 C型肝炎病毒 1 1.1.1 HCV的基因體與蛋白 2 1.1.2 HCV的生命週期 6 1.1.3 HCV的細胞培養系統 7 1.2 幹細胞 11 1.2.1 幹細胞種類 11 1.2.2 間質幹細胞 12 1.2.3 骨髓間質幹細胞的體外誘導肝細胞分化 13 1.3 研究動機 14 第二章 間質幹細胞的體外肝分化 17 2.1 前言 17 2.2 材料與方法 18 2.2.1細胞培養 18 2.2.2 體外誘導間質幹細胞之肝分化 19 2.2.3 利用RT-PCR分析肝臟特有基因的表現 19 2.2.4白蛋白的酵素結合免疫吸附法 20 2.2.5肝醣的過碘酸希夫式染色 20 2.2.6 ICG 攝取分析 21 2.2.7 HepG2的球狀體培養與CYP3A4的誘導 21 2.2.8微粒體的製備 21 2.2.9測量微粒體中CYP3A4的活性 22 2.2.10 HCVJFH1病毒的製備與細胞感染 22 2.3 結果與討論 23 2.3.1 人類骨髓系間質幹細胞之肝分化過程中的細胞型態變化 23 2.3.2 人類骨髓系間質幹細胞分化之類肝細胞的肝功能分析 23 2.3.3 分析類肝細胞之肝臟特有基因的表現 26 2.3.4 細胞色素P450 3A4 (cytochrome P450 3A4 ; CYP3A4) 的活性測試 27 2.3.5 HCV-JFH1的感染分析 29 2.4 結論 31 第三章 建構細胞模式之高效率篩選平台篩檢調節白蛋白與甲胎蛋白表現之小分子化合物 39 3.1 前言 39 3.2 材料與方法 41 3.2.1 質體建構 41 3.2.2 細胞培養 41 3.2.3 RNA純化和反轉錄聚合酶鏈鎖反應 42 3.2.4 分析pePALB-SEAP和pePAFP-SEAP質體於不同細胞株中SEAP活性表現 43 3.2.5 Huh7-ePALB-SEAP and Huh7-ePAFP-SEAP細胞株的建立 43 3.2.6 All-trans retinoic acid 和thyroxine對於Huh7-ePALB-SEAP 和 Huh7-ePAFP-SEAP cells的SEAP活性影響 44 3.2.7 評估S/B、S/N和Z' factor 44 3.2.8 高效率篩選調空白蛋白與甲胎蛋白基因表現之化合物 44 3.2.9 肝癌細胞分泌之人類白蛋白與甲胎蛋白的測量 45 3.2.10 統計分析 45 3.3 結果與討論 47 3.3.1 pePALB-SEAP與pePAFP-SEAP於肝細胞與非肝細胞中之SEAP活性表現 47 3.3.2 建立與分析Huh7-ePALB-SEAP和Huh7-ePAFP-SEAP細胞株 48 3.3.3 評估高效率篩選的統計學參數-Z' factor 49 3.3.4 小規模 (pilot) 的高效率篩選 50 3.3.5 利用SEAP分析與ELISA驗證陽性化合物的效用 51 3.3.6類固醇對於肝臟分化和HCV感染的效用 53 3.4 結論 56 第四章 發展HCV NS3/4A蛋白酶為基礎之報導系統以有效監測HCV於細胞內之活動 69 4.1 前言 69 4.2.1 細胞與病毒 71 4.2.2 質體建構 71 4.2.3 pEG(△4A4B)SEAP、pEG(△4B5A)SEAP和pEG(△5A5B)SEAP於Huh7.5細胞中的SEAP活性分析 72 4.2.4 Huh7.5-EG(Δ4B5A)SEAP細胞株的建立 72 4.2.5 Western blot 分析 72 4.2.6 偵測HCV感染之Huh7.5-EG(Δ4B5A)SEAP細胞株的SEAP活性 73 4.2.7 病毒複製數利用定量PCR (qRT-PCR) 進行測定 73 4.2.8 HCV NS3/4A蛋白酶的酵素活性分析 73 4.2.9製備HCV-JFH1病毒液 74 4.2.10 免疫螢光分析方法測量具感染性之HCV-JFH1 74 4.2.11 Anti-CD81 antibody和H-89 對於HCV-JFH1 感染的影響 75 4.2.12 Naringenin、BILN2061和IFN-α對於細胞內HCV活性的影響 75 4.2.13統計分析 76 4.3 結果與討論 77 4.3.1 HCV-JFH1病毒感染Huh7.5-EG(Δ4B5A)SEAP的特性探討 77 4.3.2 HCV感染細胞的SEAP活性與NS3/4A蛋白酶活性之相關性 79 4.3.3 各種已知的HCV抑制劑對於Huh7.5-EG(Δ4B5A)SEAP細胞的評估 79 4.3.4評估HCV-JFH1報導系統的高效率篩選的統計學參數 81 4.3.5類固醇化合物庫的篩選 82 4.3.6 Triamcinolone acetonide (TA) 於干擾素α處理之JFH1感染細胞的影響 83 4.4 結論 85 第五章 未來展望 107 參考文獻 112 圖目錄 圖 1 1. C型肝炎病毒的基因體與蛋白 16 圖 1 2. C型肝炎的生命週期史 16 圖 2 1. 間質幹細胞之肝分化流程圖 34 圖 2 2. 誘導不同時期的細胞型態變化。 35 圖 2 3. 類肝細胞分化週數和白蛋白的分泌量。 35 圖 2 4. 誘導不同時期的類肝細胞和肝腫瘤細胞株HepG2之肝醣儲存能力 36 圖 2 5. 類肝細胞和HepG2的循血綠滯留測試 36 圖 2 6. 誘導不同時期間葉幹細胞之肝細胞特有基因表現量 37 圖 2 7. 各種細胞及組織微粒體的CYP3A4酵素活性 37 圖 2 8. 肝癌細胞與類肝細胞對HCV的感受性 38 圖 3 1. pePALB-SEAP和pePAFP-SEAP的質體建構圖 59 圖 3 2. Huh7-ePALB-SEAP和Huh7-ePAFP-SEAP細胞株的SEAP活性表現 59 圖 3 3. All-trans retinoic acid和thyroxine於Huh7-ePALB-SEAP和Huh7-ePAFP- SEAP細胞中之SEAP活性與白蛋白和甲胎蛋白的相對表現量 60 圖 3 4. 評估Huh7-ePALB-SEAP和Huh7-ePAFP-SEAP 細胞株的統計學參數 (S/N、S/B和Z factor) 60 圖 3 5. 初步篩選白蛋白調控小分子之2000個化合物之訊號分散圖 62 圖 3 6. 初步篩選甲胎蛋白調控小分子之2000個化合物之訊號分散圖 63 圖 3 7. Z factor的分佈情形 64 圖 3 8. 測試Harmine於Huh7-ePALB-SEAP細胞株中的SEAP活性 65 圖 3 9. 測試多種類固醇於Huh7-ePAFP-SEAP細胞株中的SEAP活性 66 圖 3 10.測試Harmine和dexamethasone分別於Huh7細胞株中的白蛋白和甲胎蛋白mRNA表現量 67 圖 3 11.測試類肝細胞 (hepatocyte-like cells) 的C型肝炎病毒感受性 67 圖 4 1. 圖示HCV NS3/4A蛋白酶報導系統的報導質體 90 圖 4 2. 分析Huh7.5-EG(△4B5A)SEAP細胞的EG(△4B5A)SEAP融合蛋白表現情形 91 圖 4 3. 分析Huh7.5-EG(△4B5A)SEAP中HCV-JFH1感染的動力學狀態 92 圖 4 4. 於HCV-JFH1感染之Huh7.5-EG(△4B5A)SEAP細胞中,NS3/4A蛋白酶與SEAP活性的相對關係 93 圖 4 5. 利用已知的HCV抑制劑檢測Huh7.5-EG(4B5A)SEAP細胞的效用 94 圖 4 6. 評估Huh7.5-EG(△4B5A)SEAP細胞株的統計學參數 (S/N、S/B和Z factor) 95 圖 4 7. 小分子化合物率篩選流程圖 100 圖 4 8. 測試類固醇於JFH1感染的Huh7.5-EG(△4B5A)SEAP細胞株中HCV RNA相對表現量 101 圖 4 9. 利用Huh7-EG(△4B5A)SEAP細胞株進行固醇類化合物庫的篩選 102 圖 4 10.利用pSEAPN1-transfected Huh7細胞測試初步篩選獲得之六個類固醇藥物對於SEAP蛋白的分泌路徑之影響 103 圖 4 11. Huh7-EG(Δ4B5A)SEAP細胞分別處理不同濃度的六個固醇類化合物,並測量SEAP活性 104 圖 4 12. D7、B10和C6於Huh7-EG(Δ4B5A)SEAP細胞中之SEAP活性以及蛋白質表現量與RNA複製量 105 圖 4 13. IFN-a和TA於Huh7.5-EG(Δ4B5A)SEAP和Huh7-EG(Δ4B5A)SEAP細胞中之SEAP活性 106 表目錄 表 2 1. 聚合酶連鎖反應所使用之引子序列、反應產物大小、反應循環數、反應條件 34 表 3 1. 高效率篩選程序的條件 61 表 3 2. 初步篩檢白蛋白與甲胎蛋白調控分子一覽表 64 表 3 3. Z factor計算公式以及相對值之統計學意義 68 表 4 1. 次基因體複製系統的報導系統與HCV-JFH1報導系統的比較 96 表 4 2. 常見類固醇之藥名與結構 97 表 4 3. 病毒原液的RNA套數與感染效價一欄表 100

    1. 1999. Global surveillance and control of hepatitis C. Report of a WHO Consultation organized in collaboration with the Viral Hepatitis Prevention Board, Antwerp, Belgium. J Viral Hepat 6:35-47.
    2. Ahmed, M. M., T. H. Huang, and Q. D. Xie. 2008. A sensitive and rapid assay for investigating vertical transmission of hepatitis B virus via male germ line using EGFP Vector as reporter. J Biomed Biotechnol 2008:495436.
    3. Akazawa, D., T. Date, K. Morikawa, A. Murayama, M. Miyamoto, M. Kaga, H. Barth, T. F. Baumert, J. Dubuisson, and T. Wakita. 2007. CD81 expression is important for the permissiveness of Huh7 cell clones for heterogeneous hepatitis C virus infection. J Virol 81:5036-45.
    4. Alter, H. J., P. V. Holland, A. G. Morrow, R. H. Purcell, S. M. Feinstone, and Y. Moritsugu. 1975. Clinical and serological analysis of transfusion-associated hepatitis. Lancet 2:838-41.
    5. Aly, H. H., K. Shimotohno, and M. Hijikata. 2009. 3D cultured immortalized human hepatocytes useful to develop drugs for blood-borne HCV. Biochem Biophys Res Commun 379:330-4.
    6. Aly, H. H., K. Watashi, M. Hijikata, H. Kaneko, Y. Takada, H. Egawa, S. Uemoto, and K. Shimotohno. 2007. Serum-derived hepatitis C virus infectivity in interferon regulatory factor-7-suppressed human primary hepatocytes. J Hepatol 46:26-36.
    7. Antczak, C., D. Shum, S. Escobar, B. Bassit, E. Kim, V. E. Seshan, N. Wu, G. Yang, O. Ouerfelli, Y. M. Li, D. A. Scheinberg, and H. Djaballah. 2007. High-throughput identification of inhibitors of human mitochondrial peptide deformylase. J Biomol Screen 12:521-35.
    8. Baharvand, H., S. M. Hashemi, S. Kazemi Ashtiani, and A. Farrokhi. 2006. Differentiation of human embryonic stem cells into hepatocytes in 2D and 3D culture systems in vitro. Int J Dev Biol 50:645-52.
    9. Banas, A., Y. Yamamoto, T. Teratani, and T. Ochiya. 2007. Stem cell plasticity: learning from hepatogenic differentiation strategies. Dev Dyn 236:3228-41.
    10. Bartenschlager, R., M. Frese, and T. Pietschmann. 2004. Novel insights into hepatitis C virus replication and persistence. Adv Virus Res 63:71-180.
    11. Beard, M. R., G. Abell, M. Honda, A. Carroll, M. Gartland, B. Clarke, K. Suzuki, R. Lanford, D. V. Sangar, and S. M. Lemon. 1999. An infectious molecular clone of a Japanese genotype 1b hepatitis C virus. Hepatology 30:316-24.
    12. Blight, K. J., A. A. Kolykhalov, and C. M. Rice. 2000. Efficient initiation of HCV RNA replication in cell culture. Science 290:1972-4.
    13. Blight, K. J., J. A. McKeating, J. Marcotrigiano, and C. M. Rice. 2003. Efficient replication of hepatitis C virus genotype 1a RNAs in cell culture. J Virol 77:3181-90.
    14. Blight, K. J., J. A. McKeating, and C. M. Rice. 2002. Highly permissive cell lines for subgenomic and genomic hepatitis C virus RNA replication. J Virol 76:13001-14.
    15. Boulant, S., M. W. Douglas, L. Moody, A. Budkowska, P. Targett-Adams, and J. McLauchlan. 2008. Hepatitis C virus core protein induces lipid droplet redistribution in a microtubule- and dynein-dependent manner. Traffic 9:1268-82.
    16. Brazelton, T. R., F. M. Rossi, G. I. Keshet, and H. M. Blau. 2000. From marrow to brain: expression of neuronal phenotypes in adult mice. Science 290:1775-9.
    17. Buck, M. 2008. Direct infection and replication of naturally occurring hepatitis C virus genotypes 1, 2, 3 and 4 in normal human hepatocyte cultures. PLoS One 3:e2660.
    18. Cai, Z., C. Zhang, K. S. Chang, J. Jiang, B. C. Ahn, T. Wakita, T. J. Liang, and G. Luo. 2005. Robust production of infectious hepatitis C virus (HCV) from stably HCV cDNA-transfected human hepatoma cells. J Virol 79:13963-73.
    19. Callaway, J. C. 2005. Various alkaloid profiles in decoctions of Banisteriopsis caapi. J Psychoactive Drugs. 37:151-5.
    20. Callaway, J. C., G. S. Brito, and E. S. Neves. 2005. Phytochemical analyses of Banisteriopsis caapi and Psychotria viridis. J Psychoactive Drugs. 37:145-50.
    21. Callaway, J. C., L. P. Raymon, W. L. Hearn, D. J. McKenna, C. S. Grob, G. S. Brito, and D. C. Mash. 1996. Quantitation of N,N-dimethyltryptamine and harmala alkaloids in human plasma after oral dosing with ayahuasca. J Anal Toxicol 20:492-7.
    22. Cao, R., Q. Chen, X. Hou, H. Chen, H. Guan, Y. Ma, W. Peng, and A. Xu. 2004. Synthesis, acute toxicities, and antitumor effects of novel 9-substituted beta-carboline derivatives. Bioorg Med Chem 12:4613-23.
    23. Caplan, A. I. 1994. The mesengenic process. Clin Plast Surg 21:429-35.
    24. Carrere-Kremer, S., C. Montpellier-Pala, L. Cocquerel, C. Wychowski, F. Penin, and J. Dubuisson. 2002. Subcellular localization and topology of the p7 polypeptide of hepatitis C virus. J Virol 76:3720-30.
    25. Castro-Malaspina, H., R. E. Gay, G. Resnick, N. Kapoor, P. Meyers, D. Chiarieri, S. McKenzie, H. E. Broxmeyer, and M. A. Moore. 1980. Characterization of human bone marrow fibroblast colony-forming cells (CFU-F) and their progeny. Blood 56:289-301.
    26. Chen, Q., R. Chao, H. Chen, X. Hou, H. Yan, S. Zhou, W. Peng, and A. Xu. 2005. Antitumor and neurotoxic effects of novel harmine derivatives and structure-activity relationship analysis. Int J Cancer 114:675-82.
    27. Chen, S., Q. Zhang, X. Wu, P. G. Schultz, and S. Ding. 2004. Dedifferentiation of lineage-committed cells by a small molecule. J Am Chem Soc 126:410-1.
    28. Choo, Q. L., G. Kuo, A. J. Weiner, L. R. Overby, D. W. Bradley, and M. Houghton. 1989. Isolation of a cDNA clone derived from a blood-borne non-A, non-B viral hepatitis genome. Science 244:359-62.
    29. Chou, C. F., S. Shen, G. Mahadevappa, S. G. Lim, W. Hong, and Y. J. Tan. 2007. The use of hepatitis C virus NS3/4A and secreted alkaline phosphatase to quantitate cell-cell membrane fusion mediated by severe acute respiratory syndrome coronavirus S protein and the receptor angiotensin-converting enzyme 2. Anal Biochem 366:190-6.
    30. Chow, W. A., C. Jiang, and M. Guan. 2009. Anti-HIV drugs for cancer therapeutics: back to the future? Lancet Oncol 10:61-71.
    31. Ciesek, S., E. Steinmann, M. Iken, M. Ott, F. A. Helfritz, I. Wappler, M. P. Manns, H. Wedemeyer, and T. Pietschmann. Glucocorticosteroids increase cell entry by hepatitis C virus. Gastroenterology 138:1875-84.
    32. Conget, P. A., and J. J. Minguell. 1999. Phenotypical and functional properties of human bone marrow mesenchymal progenitor cells. J Cell Physiol 181:67-73.
    33. Cory, A. H., T. C. Owen, J. A. Barltrop, and J. G. Cory. 1991. Use of an aqueous soluble tetrazolium/formazan assay for cell growth assays in culture. Cancer Commun 3:207-12.
    34. Dansako, H., M. Ikeda, K. Abe, K. Mori, K. Takemoto, Y. Ariumi, and N. Kato. 2008. A new living cell-based assay system for monitoring genome-length hepatitis C virus RNA replication. Virus Res 137:72-9.
    35. Ding, S., T. Y. Wu, A. Brinker, E. C. Peters, W. Hur, N. S. Gray, and P. G. Schultz. 2003. Synthetic small molecules that control stem cell fate. Proc Natl Acad Sci U S A 100:7632-7.
    36. Dziadek, M. A., and G. K. Andrews. 1983. Tissue specificity of alpha-fetoprotein messenger RNA expression during mouse embryogenesis. Embo J 2:549-54.
    37. Egger, D., B. Wolk, R. Gosert, L. Bianchi, H. E. Blum, D. Moradpour, and K. Bienz. 2002. Expression of hepatitis C virus proteins induces distinct membrane alterations including a candidate viral replication complex. J Virol 76:5974-84.
    38. Elmaouhoub, A., J. Dudas, and G. Ramadori. 2007. Kinetics of albumin- and alpha-fetoprotein-production during rat liver development. Histochem Cell Biol 128:431-43.
    39. Erices, A., P. Conget, and J. J. Minguell. 2000. Mesenchymal progenitor cells in human umbilical cord blood. Br J Haematol 109:235-42.
    40. Evans, M. J., T. von Hahn, D. M. Tscherne, A. J. Syder, M. Panis, B. Wolk, T. Hatziioannou, J. A. McKeating, P. D. Bieniasz, and C. M. Rice. 2007. Claudin-1 is a hepatitis C virus co-receptor required for a late step in entry. Nature 446:801-5.
    41. Falkowska, E., F. Kajumo, E. Garcia, J. Reinus, and T. Dragic. 2007. Hepatitis C virus envelope glycoprotein E2 glycans modulate entry, CD81 binding, and neutralization. J Virol 81:8072-9.
    42. Farquhar, M. J., H. J. Harris, M. Diskar, S. Jones, C. J. Mee, S. U. Nielsen, C. L. Brimacombe, S. Molina, G. L. Toms, P. Maurel, J. Howl, F. W. Herberg, S. C. van Ijzendoorn, P. Balfe, and J. A. McKeating. 2008. Protein kinase A-dependent step(s) in hepatitis C virus entry and infectivity. J Virol 82:8797-811.
    43. Feinstone, S. M., A. Z. Kapikian, R. H. Purcell, H. J. Alter, and P. V. Holland. 1975. Transfusion-associated hepatitis not due to viral hepatitis type A or B. N Engl J Med 292:767-70.
    44. Fernandez, M., V. Simon, G. Herrera, C. Cao, H. Del Favero, and J. J. Minguell. 1997. Detection of stromal cells in peripheral blood progenitor cell collections from breast cancer patients. Bone Marrow Transplant 20:265-71.
    45. Fournier, C., C. Sureau, J. Coste, J. Ducos, G. Pageaux, D. Larrey, J. Domergue, and P. Maurel. 1998. In vitro infection of adult normal human hepatocytes in primary culture by hepatitis C virus. J Gen Virol 79 ( Pt 10):2367-74.
    46. Foy, E., K. Li, R. Sumpter, Jr., Y. M. Loo, C. L. Johnson, C. Wang, P. M. Fish, M. Yoneyama, T. Fujita, S. M. Lemon, and M. Gale, Jr. 2005. Control of antiviral defenses through hepatitis C virus disruption of retinoic acid-inducible gene-I signaling. Proc Natl Acad Sci U S A 102:2986-91.
    47. Foy, E., K. Li, C. Wang, R. Sumpter, Jr., M. Ikeda, S. M. Lemon, and M. Gale, Jr. 2003. Regulation of interferon regulatory factor-3 by the hepatitis C virus serine protease. Science 300:1145-8.
    48. Frain, M., E. Hardon, G. Ciliberto, and J. M. Sala-Trepat. 1990. Binding of a liver-specific factor to the human albumin gene promoter and enhancer. Mol Cell Biol 10:991-9.
    49. Friebe, P., J. Boudet, J. P. Simorre, and R. Bartenschlager. 2005. Kissing-loop interaction in the 3' end of the hepatitis C virus genome essential for RNA replication. J Virol 79:380-92.
    50. Friedenstein, A. J., J. F. Gorskaja, and N. N. Kulagina. 1976. Fibroblast precursors in normal and irradiated mouse hematopoietic organs. Exp Hematol 4:267-74.
    51. Gallinari, P., D. Brennan, C. Nardi, M. Brunetti, L. Tomei, C. Steinkuhler, and R. De Francesco. 1998. Multiple enzymatic activities associated with recombinant NS3 protein of hepatitis C virus. J Virol 72:6758-69.
    52. Gao, L., H. Aizaki, J. W. He, and M. M. Lai. 2004. Interactions between viral nonstructural proteins and host protein hVAP-33 mediate the formation of hepatitis C virus RNA replication complex on lipid raft. J Virol 78:3480-8.
    53. Goffard, A., N. Callens, B. Bartosch, C. Wychowski, F. L. Cosset, C. Montpellier, and J. Dubuisson. 2005. Role of N-linked glycans in the functions of hepatitis C virus envelope glycoproteins. J Virol 79:8400-9.
    54. Goffard, A., and J. Dubuisson. 2003. Glycosylation of hepatitis C virus envelope proteins. Biochimie 85:295-301.
    55. Gonzalez, F. J. 1992. Human cytochromes P450: problems and prospects. Trends Pharmacol Sci 13:346-52.
    56. Goobar-Larsson, L., L. Wiklund, and S. Schwartz. 2001. Intracellular hepatitis C virus RNA-dependent RNA polymerase activity. Arch Virol 146:1553-70.
    57. Grum-Tokars, V., K. Ratia, A. Begaye, S. C. Baker, and A. D. Mesecar. 2008. Evaluating the 3C-like protease activity of SARS-Coronavirus: recommendations for standardized assays for drug discovery. Virus Res 133:63-73.
    58. Hahn, C. S., Y. G. Cho, B. S. Kang, I. M. Lester, and Y. S. Hahn. 2000. The HCV core protein acts as a positive regulator of fas-mediated apoptosis in a human lymphoblastoid T cell line. Virology 276:127-37.
    59. Hamazaki, T., Y. Iiboshi, M. Oka, P. J. Papst, A. M. Meacham, L. I. Zon, and N. Terada. 2001. Hepatic maturation in differentiating embryonic stem cells in vitro. FEBS Lett 497:15-9.
    60. Hao, W., and R. Duggal. 2009. High-throughput screening of HCV RNA replication inhibitors by means of a reporter replicon system. Methods Mol Biol 510:243-50.
    61. Helle, F., A. Goffard, V. Morel, G. Duverlie, J. McKeating, Z. Y. Keck, S. Foung, F. Penin, J. Dubuisson, and C. Voisset. 2007. The neutralizing activity of anti-hepatitis C virus antibodies is modulated by specific glycans on the E2 envelope protein. J Virol 81:8101-11.
    62. Henry, S. D., H. J. Metselaar, J. Van Dijck, H. W. Tilanus, and L. J. Van Der Laan. 2007. Impact of steroids on hepatitis C virus replication in vivo and in vitro. Ann N Y Acad Sci 1110:439-47.
    63. Heo, T. H., S. M. Lee, B. Bartosch, F. L. Cosset, and C. Y. Kang. 2006. Hepatitis C virus E2 links soluble human CD81 and SR-B1 protein. Virus Res 121:58-64.
    64. Hodgson, E., and R. L. Rose. 2008. Metabolic interactions of agrochemicals in humans. Pest Manag Sci 64:617-21.
    65. Ikeda, M., K. Abe, H. Dansako, T. Nakamura, K. Naka, and N. Kato. 2005. Efficient replication of a full-length hepatitis C virus genome, strain O, in cell culture, and development of a luciferase reporter system. Biochem Biophys Res Commun 329:1350-9.
    66. Ikeda, M., M. Yi, K. Li, and S. M. Lemon. 2002. Selectable subgenomic and genome-length dicistronic RNAs derived from an infectious molecular clone of the HCV-N strain of hepatitis C virus replicate efficiently in cultured Huh7 cells. J Virol 76:2997-3006.
    67. Iro, M., J. Witteveldt, A. G. Angus, I. Woerz, A. Kaul, R. Bartenschlager, and A. H. Patel. 2009. A reporter cell line for rapid and sensitive evaluation of hepatitis C virus infectivity and replication. Antiviral Res 83:148-55.
    68. Jiang, Y., B. N. Jahagirdar, R. L. Reinhardt, R. E. Schwartz, C. D. Keene, X. R. Ortiz-Gonzalez, M. Reyes, T. Lenvik, T. Lund, M. Blackstad, J. Du, S. Aldrich, A. Lisberg, W. C. Low, D. A. Largaespada, and C. M. Verfaillie. 2002. Pluripotency of mesenchymal stem cells derived from adult marrow. Nature 418:41-9.
    69. Jin, D. Y., H. L. Wang, Y. Zhou, A. C. Chun, K. V. Kibler, Y. D. Hou, H. Kung, and K. T. Jeang. 2000. Hepatitis C virus core protein-induced loss of LZIP function correlates with cellular transformation. Embo J 19:729-40.
    70. Jones, C. T., C. L. Murray, D. K. Eastman, J. Tassello, and C. M. Rice. 2007. Hepatitis C virus p7 and NS2 proteins are essential for production of infectious virus. J Virol 81:8374-83.
    71. Jung, E. Y., M. N. Lee, H. Y. Yang, D. Yu, and K. L. Jang. 2001. The repressive activity of hepatitis C virus core protein on the transcription of p21(waf1) is regulated by protein kinase A-mediated phosphorylation. Virus Res 79:109-15.
    72. Kamiya, A., T. Kinoshita, Y. Ito, T. Matsui, Y. Morikawa, E. Senba, K. Nakashima, T. Taga, K. Yoshida, T. Kishimoto, and A. Miyajima. 1999. Fetal liver development requires a paracrine action of oncostatin M through the gp130 signal transducer. Embo J 18:2127-36.
    73. Kamiya, A., T. Kinoshita, and A. Miyajima. 2001. Oncostatin M and hepatocyte growth factor induce hepatic maturation via distinct signaling pathways. FEBS Lett 492:90-4.
    74. Kato, N., H. Yoshida, S. K. Ono-Nita, J. Kato, T. Goto, M. Otsuka, K. Lan, K. Matsushima, Y. Shiratori, and M. Omata. 2000. Activation of intracellular signaling by hepatitis B and C viruses: C-viral core is the most potent signal inducer. Hepatology 32:405-12.
    75. Kato, T., T. Date, M. Miyamoto, A. Furusaka, K. Tokushige, M. Mizokami, and T. Wakita. 2003. Efficient replication of the genotype 2a hepatitis C virus subgenomic replicon. Gastroenterology 125:1808-17.
    76. Khalil, M., A. Shariat-Panahi, R. Tootle, T. Ryder, P. McCloskey, E. Roberts, H. Hodgson, and C. Selden. 2001. Human hepatocyte cell lines proliferating as cohesive spheroid colonies in alginate markedly upregulate both synthetic and detoxificatory liver function. J Hepatol 34:68-77.
    77. Kim, C. S., J. H. Jung, T. Wakita, S. K. Yoon, and S. K. Jang. 2007. Monitoring the antiviral effect of alpha interferon on individual cells. J Virol 81:8814-20.
    78. Kim, S. S., L. F. Peng, W. Lin, W. H. Choe, N. Sakamoto, N. Kato, M. Ikeda, S. L. Schreiber, and R. T. Chung. 2007. A cell-based, high-throughput screen for small molecule regulators of hepatitis C virus replication. Gastroenterology 132:311-20.
    79. Kinoshita, T., and A. Miyajima. 2002. Cytokine regulation of liver development. Biochim Biophys Acta 1592:303-12.
    80. Kolykhalov, A. A., E. V. Agapov, K. J. Blight, K. Mihalik, S. M. Feinstone, and C. M. Rice. 1997. Transmission of hepatitis C by intrahepatic inoculation with transcribed RNA. Science 277:570-4.
    81. Koutsoudakis, G., A. Kaul, E. Steinmann, S. Kallis, V. Lohmann, T. Pietschmann, and R. Bartenschlager. 2006. Characterization of the early steps of hepatitis C virus infection by using luciferase reporter viruses. J Virol 80:5308-20.
    82. Krause, D. S., N. D. Theise, M. I. Collector, O. Henegariu, S. Hwang, R. Gardner, S. Neutzel, and S. J. Sharkis. 2001. Multi-organ, multi-lineage engraftment by a single bone marrow-derived stem cell. Cell 105:369-77.
    83. Krieger, N., V. Lohmann, and R. Bartenschlager. 2001. Enhancement of hepatitis C virus RNA replication by cell culture-adaptive mutations. J Virol 75:4614-24.
    84. Kuo, G., Q. L. Choo, H. J. Alter, G. L. Gitnick, A. G. Redeker, R. H. Purcell, T. Miyamura, J. L. Dienstag, M. J. Alter, C. E. Stevens, and et al. 1989. An assay for circulating antibodies to a major etiologic virus of human non-A, non-B hepatitis. Science 244:362-4.
    85. Kuznetsov, S. A., A. J. Friedenstein, and P. G. Robey. 1997. Factors required for bone marrow stromal fibroblast colony formation in vitro. Br J Haematol 97:561-70.
    86. Lamarre, D., P. C. Anderson, M. Bailey, P. Beaulieu, G. Bolger, P. Bonneau, M. Bos, D. R. Cameron, M. Cartier, M. G. Cordingley, A. M. Faucher, N. Goudreau, S. H. Kawai, G. Kukolj, L. Lagace, S. R. LaPlante, H. Narjes, M. A. Poupart, J. Rancourt, R. E. Sentjens, R. St George, B. Simoneau, G. Steinmann, D. Thibeault, Y. S. Tsantrizos, S. M. Weldon, C. L. Yong, and M. Llinas-Brunet. 2003. An NS3 protease inhibitor with antiviral effects in humans infected with hepatitis C virus. Nature 426:186-9.
    87. Lanford, R. E., H. Lee, D. Chavez, B. Guerra, and K. M. Brasky. 2001. Infectious cDNA clone of the hepatitis C virus genotype 1 prototype sequence. J Gen Virol 82:1291-7.
    88. Lanford, R. E., C. Sureau, J. R. Jacob, R. White, and T. R. Fuerst. 1994. Demonstration of in vitro infection of chimpanzee hepatocytes with hepatitis C virus using strand-specific RT/PCR. Virology 202:606-14.
    89. Lanza, R. P., J. B. Cibelli, M. D. West, E. Dorff, C. Tauer, and R. M. Green. 2001. The ethical reasons for stem cell research. Science 292:1299.
    90. Lee, J. C., C. F. Chang, Y. H. Chi, D. R. Hwang, and J. T. Hsu. 2004. A reporter-based assay for identifying hepatitis C virus inhibitors based on subgenomic replicon cells. J Virol Methods 116:27-33.
    91. Lee, J. C., Y. F. Shih, S. P. Hsu, T. Y. Chang, L. H. Chen, and J. T. Hsu. 2003. Development of a cell-based assay for monitoring specific hepatitis C virus NS3/4A protease activity in mammalian cells. Anal Biochem 316:162-70.
    92. Lee, J. C., C. K. Tseng, K. J. Chen, K. J. Huang, C. K. Lin, and Y. T. Lin. A cell-based reporter assay for inhibitor screening of hepatitis C virus RNA-dependent RNA polymerase. Anal Biochem 403:52-62.
    93. Lee, J. C., M. C. Yu, T. W. Lien, C. F. Chang, and J. T. Hsu. 2005. High-throughput cell-based screening for hepatitis C virus NS3/4A protease inhibitors. Assay Drug Dev Technol 3:385-92.
    94. Lee, K. D., T. K. Kuo, J. Whang-Peng, Y. F. Chung, C. T. Lin, S. H. Chou, J. R. Chen, Y. P. Chen, and O. K. Lee. 2004. In vitro hepatic differentiation of human mesenchymal stem cells. Hepatology 40:1275-84.
    95. Lindenbach, B. D., M. J. Evans, A. J. Syder, B. Wolk, T. L. Tellinghuisen, C. C. Liu, T. Maruyama, R. O. Hynes, D. R. Burton, J. A. McKeating, and C. M. Rice. 2005. Complete replication of hepatitis C virus in cell culture. Science 309:623-6.
    96. Liu, S., W. Yang, L. Shen, J. R. Turner, C. B. Coyne, and T. Wang. 2009. Tight junction proteins claudin-1 and occludin control hepatitis C virus entry and are downregulated during infection to prevent superinfection. J Virol 83:2011-4.
    97. Lohmann, V., F. Korner, A. Dobierzewska, and R. Bartenschlager. 2001. Mutations in hepatitis C virus RNAs conferring cell culture adaptation. J Virol 75:1437-49.
    98. Lohmann, V., F. Korner, J. Koch, U. Herian, L. Theilmann, and R. Bartenschlager. 1999. Replication of subgenomic hepatitis C virus RNAs in a hepatoma cell line. Science 285:110-3.
    99. Magy, N., B. Cribier, C. Schmitt, B. Ellero, D. Jaeck, K. Boudjema, P. Wolf, N. Labouret, M. Doffoel, A. Kirn, and F. Stoll-Keller. 1999. Effects of corticosteroids on HCV infection. Int J Immunopharmacol 21:253-61.
    100. Masaki, T., T. Matsuura, K. Ohkawa, T. Miyamura, I. Okazaki, T. Watanabe, and T. Suzuki. 2006. All-trans retinoic acid down-regulates human albumin gene expression through the induction of C/EBPbeta-LIP. Biochem J 397:345-53.
    101. McKerrow, J. H., P. J. Rosenthal, R. Swenerton, and P. Doyle. 2008. Development of protease inhibitors for protozoan infections. Curr Opin Infect Dis 21:668-72.
    102. Michalopoulos, G. K., W. C. Bowen, K. Mule, and J. Luo. 2003. HGF-, EGF-, and dexamethasone-induced gene expression patterns during formation of tissue in hepatic organoid cultures. Gene Expr 11:55-75.
    103. Minguell, J. J., A. Erices, and P. Conget. 2001. Mesenchymal stem cells. Exp Biol Med (Maywood) 226:507-20.
    104. Miyanari, Y., K. Atsuzawa, N. Usuda, K. Watashi, T. Hishiki, M. Zayas, R. Bartenschlager, T. Wakita, M. Hijikata, and K. Shimotohno. 2007. The lipid droplet is an important organelle for hepatitis C virus production. Nat Cell Biol 9:1089-97.
    105. Moradpour, D., V. Brass, E. Bieck, P. Friebe, R. Gosert, H. E. Blum, R. Bartenschlager, F. Penin, and V. Lohmann. 2004. Membrane association of the RNA-dependent RNA polymerase is essential for hepatitis C virus RNA replication. J Virol 78:13278-84.
    106. Moradpour, D., F. Penin, and C. M. Rice. 2007. Replication of hepatitis C virus. Nat Rev Microbiol 5:453-63.
    107. Morsica, G., G. Tambussi, G. Sitia, R. Novati, A. Lazzarin, L. Lopalco, and S. Mukenge. 1999. Replication of hepatitis C virus in B lymphocytes (CD19+). Blood 94:1138-9.
    108. Nahmias, Y., J. Goldwasser, M. Casali, D. van Poll, T. Wakita, R. T. Chung, and M. L. Yarmush. 2008. Apolipoprotein B-dependent hepatitis C virus secretion is inhibited by the grapefruit flavonoid naringenin. Hepatology 47:1437-45.
    109. Nakabayashi, H., Y. Koyama, H. Suzuki, H. M. Li, M. Sakai, Y. Miura, N. C. Wong, and S. Nishi. 2004. Functional mapping of tissue-specific elements of the human alpha-fetoprotein gene enhancer. Biochem Biophys Res Commun 318:773-85.
    110. Owsianka, A. M., J. M. Timms, A. W. Tarr, R. J. Brown, T. P. Hickling, A. Szwejk, K. Bienkowska-Szewczyk, B. J. Thomson, A. H. Patel, and J. K. Ball. 2006. Identification of conserved residues in the E2 envelope glycoprotein of the hepatitis C virus that are critical for CD81 binding. J Virol 80:8695-704.
    111. Pallaoro, M., A. Lahm, G. Biasiol, M. Brunetti, C. Nardella, L. Orsatti, F. Bonelli, S. Orru, F. Narjes, and C. Steinkuhler. 2001. Characterization of the hepatitis C virus NS2/3 processing reaction by using a purified precursor protein. J Virol 75:9939-46.
    112. Pawlotsky, J. M. 2004. Pathophysiology of hepatitis C virus infection and related liver disease. Trends Microbiol 12:96-102.
    113. Piersma, A. H., K. G. Brockbank, R. E. Ploemacher, E. van Vliet, K. M. Brakel-van Peer, and P. J. Visser. 1985. Characterization of fibroblastic stromal cells from murine bone marrow. Exp Hematol 13:237-43.
    114. Pietschmann, T., A. Kaul, G. Koutsoudakis, A. Shavinskaya, S. Kallis, E. Steinmann, K. Abid, F. Negro, M. Dreux, F. L. Cosset, and R. Bartenschlager. 2006. Construction and characterization of infectious intragenotypic and intergenotypic hepatitis C virus chimeras. Proc Natl Acad Sci U S A 103:7408-13.
    115. Pileri, P., Y. Uematsu, S. Campagnoli, G. Galli, F. Falugi, R. Petracca, A. J. Weiner, M. Houghton, D. Rosa, G. Grandi, and S. Abrignani. 1998. Binding of hepatitis C virus to CD81. Science 282:938-41.
    116. Ploss, A., M. J. Evans, V. A. Gaysinskaya, M. Panis, H. You, Y. P. de Jong, and C. M. Rice. 2009. Human occludin is a hepatitis C virus entry factor required for infection of mouse cells. Nature 457:882-6.
    117. Porter, T. D., and M. J. Coon. 1991. Cytochrome P-450. Multiplicity of isoforms, substrates, and catalytic and regulatory mechanisms. J Biol Chem 266:13469-72.
    118. Prockop, D. J. 1997. Marrow stromal cells as stem cells for nonhematopoietic tissues. Science 276:71-4.
    119. Ray, R. B., K. Meyer, and R. Ray. 1996. Suppression of apoptotic cell death by hepatitis C virus core protein. Virology 226:176-82.
    120. Reyes, M., T. Lund, T. Lenvik, D. Aguiar, L. Koodie, and C. M. Verfaillie. 2001. Purification and ex vivo expansion of postnatal human marrow mesodermal progenitor cells. Blood 98:2615-25.
    121. Reyes, M., and C. M. Verfaillie. 2001. Characterization of multipotent adult progenitor cells, a subpopulation of mesenchymal stem cells. Ann N Y Acad Sci 938:231-3; discussion 233-5.
    122. Robers, M. B., R. A. Horton, M. R. Bercher, K. W. Vogel, and T. Machleidt. 2008. High-throughput cellular assays for regulated posttranslational modifications. Anal Biochem 372:189-97.
    123. Roccasecca, R., H. Ansuini, A. Vitelli, A. Meola, E. Scarselli, S. Acali, M. Pezzanera, B. B. Ercole, J. McKeating, A. Yagnik, A. Lahm, A. Tramontano, R. Cortese, and A. Nicosia. 2003. Binding of the hepatitis C virus E2 glycoprotein to CD81 is strain specific and is modulated by a complex interplay between hypervariable regions 1 and 2. J Virol 77:1856-67.
    124. Sainz, B., Jr., V. TenCate, and S. L. Uprichard. 2009. Three-dimensional Huh7 cell culture system for the study of Hepatitis C virus infection. Virol J 6:103.
    125. Sakai, A., M. S. Claire, K. Faulk, S. Govindarajan, S. U. Emerson, R. H. Purcell, and J. Bukh. 2003. The p7 polypeptide of hepatitis C virus is critical for infectivity and contains functionally important genotype-specific sequences. Proc Natl Acad Sci U S A 100:11646-51.
    126. Schaller, T., N. Appel, G. Koutsoudakis, S. Kallis, V. Lohmann, T. Pietschmann, and R. Bartenschlager. 2007. Analysis of hepatitis C virus superinfection exclusion by using novel fluorochrome gene-tagged viral genomes. J Virol 81:4591-603.
    127. Schmidt-Mende, J., E. Bieck, T. Hugle, F. Penin, C. M. Rice, H. E. Blum, and D. Moradpour. 2001. Determinants for membrane association of the hepatitis C virus RNA-dependent RNA polymerase. J Biol Chem 276:44052-63.
    128. Schwartz, R. E., M. Reyes, L. Koodie, Y. Jiang, M. Blackstad, T. Lund, T. Lenvik, S. Johnson, W. S. Hu, and C. M. Verfaillie. 2002. Multipotent adult progenitor cells from bone marrow differentiate into functional hepatocyte-like cells. J Clin Invest 109:1291-302.
    129. Seipp, S., H. M. Mueller, E. Pfaff, W. Stremmel, L. Theilmann, and T. Goeser. 1997. Establishment of persistent hepatitis C virus infection and replication in vitro. J Gen Virol 78 ( Pt 10):2467-76.
    130. Selden, C., M. Khalil, and H. Hodgson. 2000. Three dimensional culture upregulates extracellular matrix protein expression in human liver cell lines--a step towards mimicking the liver in vivo? Int J Artif Organs 23:774-81.
    131. Shields, L. E., and R. G. Andrews. 1998. Gestational age changes in circulating CD34+ hematopoietic stem/progenitor cells in fetal cord blood. Am J Obstet Gynecol 178:931-7.
    132. Shimizu, Y. K., A. Iwamoto, M. Hijikata, R. H. Purcell, and H. Yoshikura. 1992. Evidence for in vitro replication of hepatitis C virus genome in a human T-cell line. Proc Natl Acad Sci U S A 89:5477-81.
    133. Shinohara, H., A. Tanaka, T. Kitai, N. Yanabu, T. Inomoto, S. Satoh, E. Hatano, Y. Yamaoka, and K. Hirao. 1996. Direct measurement of hepatic indocyanine green clearance with near-infrared spectroscopy: separate evaluation of uptake and removal. Hepatology 23:137-44.
    134. Simmonds, P. 1999. Viral heterogeneity of the hepatitis C virus. J Hepatol 31 Suppl 1:54-60.
    135. Sklan, E. H., P. Charuworn, P. S. Pang, and J. S. Glenn. 2009. Mechanisms of HCV survival in the host. Nat Rev Gastroenterol Hepatol 6:217-27.
    136. Sladek, F. M., W. M. Zhong, E. Lai, and J. E. Darnell, Jr. 1990. Liver-enriched transcription factor HNF-4 is a novel member of the steroid hormone receptor superfamily. Genes Dev 4:2353-65.
    137. Song, Y., D. Kesuma, J. Wang, Y. Deng, J. Duan, J. H. Wang, and R. Z. Qi. 2004. Specific inhibition of cyclin-dependent kinases and cell proliferation by harmine. Biochem Biophys Res Commun 317:128-32.
    138. Soriano, V., M. G. Peters, and S. Zeuzem. 2009. New therapies for hepatitis C virus infection. Clin Infect Dis 48:313-20.
    139. Sumpter, R., Jr., Y. M. Loo, E. Foy, K. Li, M. Yoneyama, T. Fujita, S. M. Lemon, and M. Gale, Jr. 2005. Regulating intracellular antiviral defense and permissiveness to hepatitis C virus RNA replication through a cellular RNA helicase, RIG-I. J Virol 79:2689-99.
    140. Suzuki, A., A. Iwama, H. Miyashita, H. Nakauchi, and H. Taniguchi. 2003. Role for growth factors and extracellular matrix in controlling differentiation of prospectively isolated hepatic stem cells. Development 130:2513-24.
    141. Suzuki, T., K. Ishii, H. Aizaki, and T. Wakita. 2007. Hepatitis C viral life cycle. Adv Drug Deliv Rev 59:1200-12.
    142. Sy, T., and M. M. Jamal. 2006. Epidemiology of hepatitis C virus (HCV) infection. Int J Med Sci 3:41-6.
    143. Takahashi, K., K. Tanabe, M. Ohnuki, M. Narita, T. Ichisaka, K. Tomoda, and S. Yamanaka. 2007. Induction of pluripotent stem cells from adult human fibroblasts by defined factors. Cell 131:861-72.
    144. Tang, H., and H. Grise. 2009. Cellular and molecular biology of HCV infection and hepatitis. Clin Sci (Lond) 117:49-65.
    145. Tellinghuisen, T. L., J. Marcotrigiano, A. E. Gorbalenya, and C. M. Rice. 2004. The NS5A protein of hepatitis C virus is a zinc metalloprotein. J Biol Chem 279:48576-87.
    146. Thibeault, D., R. Maurice, L. Pilote, D. Lamarre, and A. Pause. 2001. In vitro characterization of a purified NS2/3 protease variant of hepatitis C virus. J Biol Chem 276:46678-84.
    147. Thomson, J. A., J. Itskovitz-Eldor, S. S. Shapiro, M. A. Waknitz, J. J. Swiergiel, V. S. Marshall, and J. M. Jones. 1998. Embryonic stem cell lines derived from human blastocysts. Science 282:1145-7.
    148. Troesch, M., I. Meunier, P. Lapierre, N. Lapointe, F. Alvarez, M. Boucher, and H. Soudeyns. 2006. Study of a novel hypervariable region in hepatitis C virus (HCV) E2 envelope glycoprotein. Virology 352:357-67.
    149. van der Kooy, D., and S. Weiss. 2000. Why stem cells? Science 287:1439-41.
    150. Van Reeth, T., P. Gabant, C. Szpirer, and J. Szpirer. 2002. Stimulation of the alpha-fetoprotein promoter by unliganded thyroid hormone receptor in association with protein deacetylation. Mol Cell Endocrinol 188:99-109.
    151. Wakita, T., T. Pietschmann, T. Kato, T. Date, M. Miyamoto, Z. Zhao, K. Murthy, A. Habermann, H. G. Krausslich, M. Mizokami, R. Bartenschlager, and T. J. Liang. 2005. Production of infectious hepatitis C virus in tissue culture from a cloned viral genome. Nat Med 11:791-6.
    152. Wang, N., S. Tsuruoka, H. Yamamoto, S. Enosawa, T. Omasa, N. Sata, T. Matsumura, H. Nagai, and A. Fujimura. 2005. The bioreactor with CYP3A4- and glutamine synthetase-introduced HepG2 cells: treatment of hepatic failure dog with diazepam overdosage. Artif Organs 29:681-4.
    153. Wang, W., K. Itaka, S. Ohba, N. Nishiyama, U. I. Chung, Y. Yamasaki, and K. Kataoka. 2009. 3D spheroid culture system on micropatterned substrates for improved differentiation efficiency of multipotent mesenchymal stem cells. Biomaterials 30:2705-15.
    154. Weiner, A. J., M. J. Brauer, J. Rosenblatt, K. H. Richman, J. Tung, K. Crawford, F. Bonino, G. Saracco, Q. L. Choo, M. Houghton, and et al. 1991. Variable and hypervariable domains are found in the regions of HCV corresponding to the flavivirus envelope and NS1 proteins and the pestivirus envelope glycoproteins. Virology 180:842-8.
    155. Williams, J. A., R. Hyland, B. C. Jones, D. A. Smith, S. Hurst, T. C. Goosen, V. Peterkin, J. R. Koup, and S. E. Ball. 2004. Drug-drug interactions for UDP-glucuronosyltransferase substrates: a pharmacokinetic explanation for typically observed low exposure (AUCi/AUC) ratios. Drug Metab Dispos 32:1201-8.
    156. Wu, X., S. Ding, Q. Ding, N. S. Gray, and P. G. Schultz. 2002. A small molecule with osteogenesis-inducing activity in multipotent mesenchymal progenitor cells. J Am Chem Soc 124:14520-1.
    157. Wu, X., S. Ding, Q. Ding, N. S. Gray, and P. G. Schultz. 2004. Small molecules that induce cardiomyogenesis in embryonic stem cells. J Am Chem Soc 126:1590-1.
    158. Yamada, T., M. Yoshikawa, S. Kanda, Y. Kato, Y. Nakajima, S. Ishizaka, and Y. Tsunoda. 2002. In vitro differentiation of embryonic stem cells into hepatocyte-like cells identified by cellular uptake of indocyanine green. Stem Cells 20:146-54.
    159. Yamaguchi, A., S. Tazuma, T. Nishioka, W. Ohishi, H. Hyogo, S. Nomura, and K. Chayama. 2005. Hepatitis C virus core protein modulates fatty acid metabolism and thereby causes lipid accumulation in the liver. Dig Dis Sci 50:1361-71.
    160. Yanagi, M., R. H. Purcell, S. U. Emerson, and J. Bukh. 1997. Transcripts from a single full-length cDNA clone of hepatitis C virus are infectious when directly transfected into the liver of a chimpanzee. Proc Natl Acad Sci U S A 94:8738-43.
    161. Yang, W., C. Qiu, N. Biswas, J. Jin, S. C. Watkins, R. C. Montelaro, C. B. Coyne, and T. Wang. 2008. Correlation of the tight junction-like distribution of Claudin-1 to the cellular tropism of hepatitis C virus. J Biol Chem 283:8643-53.
    162. Yang, Y., J. Kitagaki, H. Wang, D. X. Hou, and A. O. Perantoni. 2009. Targeting the ubiquitin-proteasome system for cancer therapy. Cancer Sci 100:24-8.
    163. Yao, H. T., Y. W. Chang, S. J. Lan, C. T. Chen, J. T. Hsu, and T. K. Yeh. 2006. The inhibitory effect of polyunsaturated fatty acids on human CYP enzymes. Life Sci 79:2432-40.
    164. Yi, M., R. A. Villanueva, D. L. Thomas, T. Wakita, and S. M. Lemon. 2006. Production of infectious genotype 1a hepatitis C virus (Hutchinson strain) in cultured human hepatoma cells. Proc Natl Acad Sci U S A 103:2310-5.
    165. Yoshizawa, A., Y. Takada, Y. Fujimoto, T. Koshiba, H. Haga, S. Nabeshima, and S. Uemoto. 2006. Liver transplantation from an identical twin without immunosuppression, with early recurrence of hepatitis C. Am J Transplant 6:2812-6.
    166. Yu, X., B. Sainz, Jr., and S. L. Uprichard. 2009. Development of a Cell-Based Hepatitis C Virus (HCV) Infection FRET Assay for High Throughput Antiviral Compound Screening. Antimicrob Agents Chemother doi:10.1128/AAC.00495-09.
    167. Zannis, V. I., J. L. Breslow, T. R. SanGiacomo, D. P. Aden, and B. B. Knowles. 1981. Characterization of the major apolipoproteins secreted by two human hepatoma cell lines. Biochemistry 20:7089-96.
    168. Zhang, J. H., T. D. Chung, and K. R. Oldenburg. 1999. A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays. J Biomol Screen 4:67-73.
    169. Zhang, M., B. Gaschen, W. Blay, B. Foley, N. Haigwood, C. Kuiken, and B. Korber. 2004. Tracking global patterns of N-linked glycosylation site variation in highly variable viral glycoproteins: HIV, SIV, and HCV envelopes and influenza hemagglutinin. Glycobiology 14:1229-46.
    170. Zhang, Y., P. Weady, R. Duggal, and W. Hao. 2008. Novel chimeric genotype 1b/2a hepatitis C virus suitable for high-throughput screening. Antimicrob Agents Chemother 52:666-74.
    171. Zhong, J., P. Gastaminza, G. Cheng, S. Kapadia, T. Kato, D. R. Burton, S. F. Wieland, S. L. Uprichard, T. Wakita, and F. V. Chisari. 2005. Robust hepatitis C virus infection in vitro. Proc Natl Acad Sci U S A 102:9294-9.
    172. Zimmermann, T., C. Otto, M. Hoppe-Lotichius, S. Biesterfeld, A. Lautem, M. Knaak, A. Zimmermann, A. P. Barreiros, M. Heise, J. M. Schattenberg, M. F. Sprinzl, P. R. Galle, G. Otto, and M. Schuchmann. 2009. Risk factors in patients with rapid recurrent hepatitis C virus-related cirrhosis within 1 year after liver transplantation. Transplant Proc 41:2549-56.

    無法下載圖示 全文公開日期 本全文未授權公開 (校內網路)
    全文公開日期 本全文未授權公開 (校外網路)
    全文公開日期 本全文未授權公開 (國家圖書館:臺灣博碩士論文系統)
    QR CODE